| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1550 |
|---|
| Symbol | |
|---|
| ID | 5832489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1731040 |
|---|
| End bp | 1732464 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641367348 |
|---|
| Product | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
|---|
| Protein accession | YP_001639020 |
|---|
| Protein GI | 163850977 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0380] Trehalose-6-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCACGTC TGATCATCGT CTCCAACCGT GTCGCCGTAC CCGCCGAGGG TAAGGATGCG
GTCTCCGCAG GGGGACTCGC CGTCGCGGTC AAGGAAGCTT TCTCCTCCTA CGAGGGGTTG
TGGTTCGGTT GGAGCGGCAA CATCCGCGAC AACCCGAGCA CCGAGCCGGA ACTGATCGAC
CGCGGGTCGA TCCAGTACGC CGTCCTCGAC CTGTCGCCGC AAGACCATCG CGAGTACTAC
GCCGGCTTTG CCAACCGGGC GCTCTGGCCG ATCATGCATT ACCGGATCGG GCTGGGGACG
TTCTCCCGCT CGGATTATGC CGGCTACCAG CGCGTCAACC AGACCTTCGC CCAGGCGCTC
GCCAAATTGG TCGAGCCGGA CGACCTGATC TGGGTGCACG ACTACCACCT GCTGCCGCTG
GCGAGCGAGC TGCGCGGCCA GGGCATCGCC AACCCGATCG GCTACTTCCA CCACATCCCG
TGGCCCGCCG CCGACGTGTT CAACACCCTG CCCGCCAGCA ACGAGCTGCT GCGCGCCATG
GCCGATTACG ACCTAATCGG ATTGCAGACC GATTCGGACG TGCAGAACCT CTCGCGCAAC
TTCATCGACA CGATGCGGGC GATCCCGCTC GGCGGCGGCT CGATGATGGT GGACGGGCGG
CGCACGCGAA TCCGCTCCTT CCCCATCGGC ATCGATGTCG CCAGCTTCAA GGAGGCCGCC
GACAAGGCCG GCTCCAACAA GGTGGTGCGG GAGACCATGG CGGGCCTGCG CACCCGCAAG
CTGCTCATCG GCGTCGATCG GCTCGACTAC TCGAAGGGCG TGCCCGAGCG CATGGAGGCG
GTGGACCGCT TCTTCGCCTC GAATCCGGAT CAGCGCGGCA ACGTCGTCTA CATCCAGATC
ACGCCGAAAT CCCGCAGCGA GGTGCCGGAA TACGAACAGC TCTCGCGCGA GGTGAACGAG
AAGGTCGGCG ACATTAACGG CATGCTCGGC GAGCCGGCCT GGACGCCGAT CCAGTACGTC
ACCAAGGCCT ATCCCCGCCC GGTCCTCGCC GGTCTCTACC GGGCCGCCCG CGTCGGCCTC
GTCACGCCGA TGCGCGACGG CATGAACCTT GTGGCCAAGG AATACGTCGT CGCCCAGAGC
GAGGAGGATC CCGGCGTCCT CGTCCTCTCG AAATTCGCGG GTGCGGCCCG GCAGTTGCCC
GAGGCGCTGC TGGTGAACCC CTACGACCGC TTCGAGGTCG CCGAGGCGAT ACGGCAGGCG
CTCTACATGC CCCGCGGCGA GCGCCTGGAG CGCTGGAAGC CGATGGCGGA CCGCATGCGG
CGCGAAGACG TGGATTGGTG GGCCCGCTGC TTCATGGTGG AGCTGGAGAC CTTCCGCACC
GTCGAGCGCG AGCCGCCGAG CACGACGGCG GCGGCGGCGG AGTAG
|
|---|
| Protein sequence | MARLIIVSNR VAVPAEGKDA VSAGGLAVAV KEAFSSYEGL WFGWSGNIRD NPSTEPELID
RGSIQYAVLD LSPQDHREYY AGFANRALWP IMHYRIGLGT FSRSDYAGYQ RVNQTFAQAL
AKLVEPDDLI WVHDYHLLPL ASELRGQGIA NPIGYFHHIP WPAADVFNTL PASNELLRAM
ADYDLIGLQT DSDVQNLSRN FIDTMRAIPL GGGSMMVDGR RTRIRSFPIG IDVASFKEAA
DKAGSNKVVR ETMAGLRTRK LLIGVDRLDY SKGVPERMEA VDRFFASNPD QRGNVVYIQI
TPKSRSEVPE YEQLSREVNE KVGDINGMLG EPAWTPIQYV TKAYPRPVLA GLYRAARVGL
VTPMRDGMNL VAKEYVVAQS EEDPGVLVLS KFAGAARQLP EALLVNPYDR FEVAEAIRQA
LYMPRGERLE RWKPMADRMR REDVDWWARC FMVELETFRT VEREPPSTTA AAAE
|
|---|
| |