| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1549 |
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| Symbol | |
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| ID | 5832488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 1728864 |
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| End bp | 1730957 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641367347 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001639019 |
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| Protein GI | 163850976 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.177873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGTCA TCGAGGAGGG CCTGCCGACA CCGCTTGGCG CGCATTTCGA CGGCCGCGGC
GTCAACTTCG CCCTCTTCTC GCAGAACGCG ACCCGGGTCG ATCTCTGCCT GTTCGATCCC
GGCGCCCGTC ACGAATCGCG CACGATCCGC CTGCCCTGCC GGACCGATGA CGTCTTCCAC
GGCTATCTCC ACGGCCTTCT GCCCGGGCAG CAATACGCCT ACCGCGTGTT CGGCCCCTGG
GACCCGGCCG CCGGCCACCG CTTCAACCCG GCCAAACTCG TCCTCGACCC CTATGCCCGC
GAGATCGCCG GGCGCATCCG CTGGCACGAC GCGCTCTACA GCCATCGCCA TGGCGGCGCG
CGCGAAGACC AGATCGACCG GCGCGACAGC GCCCCGTTCG TGCCCCGCGG TGTGGTCACC
CGTCCCGATA CCCCCGACGC CATCGCCCTG CCCGCACCGC GCCCGCTCCA CGAGACGGTG
ATCTACGAGG CGCACGTCAA GGCGCTGACC CGGACGCATC CGGCCCTCTC GGAAGCCGAG
CGCGGGACCT ATCTCGGCCT CGCCCATCCG GCGATCATCG AGCACCTGTT GAAGCTCGGC
GTCACCGCCC TCGAACTCCT GCCGATCCAG GCCTTCGCCG ACGACCGCTT CCTGATCGAC
AAGGGGCTCG TCAATTTCTG GGGCTACCAG CCCTACAACT ACTTCGCGCC GGAGCCGCGC
TATCTCGGCG AGGGCGGGGC GAGCGGGCTG CGCTTCGCCA TCCGCGAATT GGCCTCGGCC
GGCATCGAGA CCCTGATCGA CGTGGTCTAC AACCACACGG CCGAGGGCGA CCATCGCGGG
CCGACGCTCG CCTTCCGCGG CATCGACAAT GCGAGCTACT ACAAGCTCGA CCCCGACAAC
CTTCGCCGCA ACATCGACTG CACCGGCTGC GGCAACACCC TGAACGTCGC CCATCCGCGG
GTGATGCGGA TGGTGCTCGA CAGCCTGCGC CACTGGGTGA CCGCCTATGG CGTGGCGGGT
TTCCGCTTCG ATCTCGCGAC GAGCCTCGGC CGCGCGCCGA GCGACTTCTC CCCCCAGGCC
GCGTTCTTCC AGGCGGTGCA GCAGGATCCG GTCCTCTCGC GGGTCAAGCT CATCGCCGAG
CCCTGGGATA TCGGCGGGGG CGGCTACCAG CTCGGCGGCT ACCCCTATGG CTGGAGCGAG
TGGAACGACC AGTTCCGCGA CAACCTCCGT GGCTTCTGGC GGGGGGATTC CGGCACGCTG
GCCAAGCTGA CGCAGGGGCT CTCCGGCTCG CGCGAAATCT TCCTGCCTTC GGGCCGTTCG
CCGCTCGCCA GCATCAACTT CGTCGCCTCG CATGACGGCT ACACCCTCGC CGACGTGGTC
GCCTACGAGG AGAAGCACAA CGAGGCCAAT GGCGAGGAGA ACCGCGACGG CCACGGCCAC
AACCTCTCGG CCAATTACGG CGTCGAGGGG CCGACCGACG ATCCCGCCAT CCTGGCCCTA
CGCGCCCGGC AGAAGCGCAA CATGCTGGCC TGCGTGTTCT TCGCGCAGGG CGTGCCGATG
CTGCTGATGG GCGACGAGCG ATCGCGCACG CAGTCCGGCA ACAACAACGC CTATTGCCAG
GACGGCGCAT TGAGCTGGAT GGATTGGGAG AACGACCCCG ATCCGACGCT CACCGAGTTC
GTGGCGAACC TCGCCGCGCT CCGCCGGGTC TGCTGTTCCC TGCGGCGGCG GCACTTCCTC
GTCGGCAGCC GCGTCGGCGA GACGGCCCTG AAGGACGTGC ACTGGCTTTC CCCCGATGGG
ACCGAGATGG ACGCGGCCGC CTGGGGTGAC GGCGAGCGCC GCGCCTTCGG CATGCAGATG
AGCAACGATA TCGAGGACTC GGAGCGCGTC CTCATTCTCA TGAACGCGGC GCCCGAGCCT
TGCCCCTTCG CCCTGCCGCC CGATCTCGGC GGCCCCTGGC GTCCCGTCTT CGACACCACC
CTCGACACCG GCAAGGTTCT CGACGGAGCG CGGCCGCCGG TTCCGGTCGG TGGCACCGTC
GATCTGCCCG AGCGGGCGGT GCTGGTGCTG AAGTCGCCGC CCCTCCTCGA TTGA
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| Protein sequence | MIVIEEGLPT PLGAHFDGRG VNFALFSQNA TRVDLCLFDP GARHESRTIR LPCRTDDVFH
GYLHGLLPGQ QYAYRVFGPW DPAAGHRFNP AKLVLDPYAR EIAGRIRWHD ALYSHRHGGA
REDQIDRRDS APFVPRGVVT RPDTPDAIAL PAPRPLHETV IYEAHVKALT RTHPALSEAE
RGTYLGLAHP AIIEHLLKLG VTALELLPIQ AFADDRFLID KGLVNFWGYQ PYNYFAPEPR
YLGEGGASGL RFAIRELASA GIETLIDVVY NHTAEGDHRG PTLAFRGIDN ASYYKLDPDN
LRRNIDCTGC GNTLNVAHPR VMRMVLDSLR HWVTAYGVAG FRFDLATSLG RAPSDFSPQA
AFFQAVQQDP VLSRVKLIAE PWDIGGGGYQ LGGYPYGWSE WNDQFRDNLR GFWRGDSGTL
AKLTQGLSGS REIFLPSGRS PLASINFVAS HDGYTLADVV AYEEKHNEAN GEENRDGHGH
NLSANYGVEG PTDDPAILAL RARQKRNMLA CVFFAQGVPM LLMGDERSRT QSGNNNAYCQ
DGALSWMDWE NDPDPTLTEF VANLAALRRV CCSLRRRHFL VGSRVGETAL KDVHWLSPDG
TEMDAAAWGD GERRAFGMQM SNDIEDSERV LILMNAAPEP CPFALPPDLG GPWRPVFDTT
LDTGKVLDGA RPPVPVGGTV DLPERAVLVL KSPPLLD
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