| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1544 |
|---|
| Symbol | |
|---|
| ID | 5833428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 1724347 |
|---|
| End bp | 1725228 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641367342 |
|---|
| Product | 3-hydroxybutyryl-CoA dehydrogenase |
|---|
| Protein accession | YP_001639014 |
|---|
| Protein GI | 163850971 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.904037 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0810474 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATCG AGATCAAGAC GGTCGGCATC GTCGGTGCCG GCCAGATGGG GAACGGCATC
GCGCATGTCT GTGCGACCTC GGGCCTCCAC GTTCGGCTGA ACGACCGCGA TCCGCAGCGG
ATCGATGCCG GTCTCGCGCT GATCGACGCG AACCTCACGC GTCAGGTCCA GAAGGGAACG
CTGAGCGACG AGCAGCGCCG CAGCGCCCTA GACCGCATCG CCGCGGCCCG CAGCTACGAC
GACCTCGCGC CCTGCGACCT CGTCATCGAG GCGGCGACCG AGGACGAGGC GACCAAGCGC
AAGATCTTCC AGGCGCTCTG CCCCTCGCTC AAGCCCGACG CCCTGGTCGC GACCAACACC
TCCTCGATCT CGATCACGCG GCTCGCGGCA GCGACCGACC GGCCGGACCG CTTCATCGGC
ATCCACTTCA TGAACCCGGT GCCGGTGATG CAGCTCGTCG AGCTGATCCG CGGCATCGCC
ACCGAAGATC CGACCTACGA ATCGGCCAAG GCTTTCATCG CCCGGCTCGG CAAGACTTCG
ACCATGTCGG AGGACTTCCC GGCCTTCATT GTCAACCGCA TCCTGCTGCC GATGATCAAC
GAGGCGATCT ACACGCTCTA CGAGGGCGTG GGCTCGGTCG AGTCGATCGA TACCGCGATG
CGGCTGGGCG CGAACCACCC GATGGGGCCG CTGCAGCTCG CCGACTTCAT CGGCCTCGAT
ACCTGCCTGT CGGTGATGCA GGTGCTCTAC GAGGGTCTGG CGGATTCGAA ATACCGCCCC
TGCCCGCTGC TGGTGAAATA CGTCGAGGCC GGCTGGCTCG GCCGCAAGAC CAAGCGCGGG
TTCTACGATT ACCGTGGCGA GACGCCGATC CCGACGCGCT GA
|
|---|
| Protein sequence | MGIEIKTVGI VGAGQMGNGI AHVCATSGLH VRLNDRDPQR IDAGLALIDA NLTRQVQKGT
LSDEQRRSAL DRIAAARSYD DLAPCDLVIE AATEDEATKR KIFQALCPSL KPDALVATNT
SSISITRLAA ATDRPDRFIG IHFMNPVPVM QLVELIRGIA TEDPTYESAK AFIARLGKTS
TMSEDFPAFI VNRILLPMIN EAIYTLYEGV GSVESIDTAM RLGANHPMGP LQLADFIGLD
TCLSVMQVLY EGLADSKYRP CPLLVKYVEA GWLGRKTKRG FYDYRGETPI PTR
|
|---|
| |