Gene Mext_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1536 
Symbol 
ID5831973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1715927 
End bp1717021 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content69% 
IMG OID641367334 
ProductUV damage repair endonuclease 
Protein accessionYP_001639006 
Protein GI163850963 
COG category[L] Replication, recombination and repair 
COG ID[COG4294] UV damage repair endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.136492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCA AGCCCAACCC CTCCCAGCCG AACATCGCCG AGCCGCCCCG CCTCGGCTTC 
TGCTGCACCT TCATCCCCGA TCCGGACCCG GCCCACAAAA CCCTGAAGGC CGCCAAGGAC
GCGGCCAAGC TGATGAACCT CGGCACGGTG ACGATGGCGC ATCTGGAGCG CCTCGGGCCC
ACCGCGCGCT TCGAGAAGCT GGAGGGCGTG GTGCGCCACA ACCTCGCGGC GCTGGAACGC
CAGATCGCCT GGGTGTCGGC CCGGCCGCCC CTGGAGCGGC TGCTGCGCAT GGCGAGCTCG
GTGCTGCCCG GCTACACCCA TCCGGTGGCC GAGCCACTTT ATGCGCAAGC CCCGATGCGC
GCCCTGATCG AGGCCGGCCT CGCCCGGATC GGCGAGCAGG CACGGGCAGG CGACGTGCGG
CTCAGCATGC ATCCCGGCCC GTTCTGCATC ATCGCCTCGC GCAACCCGAA CGCGCAGAAA
AACGGCATCG CCGAACTCGA ATACCATGCC GAGGTGATGG CGATGCTGGG CTACGGCTCC
GGCTGGCACC CGCATGGTGC CCACGTGAAC ATCCATATCG GCGGGCGCGA GCCCGGCATC
GAGGGATTTC GCGAGAGTCT GTCGCTGATC TCGGAGACGG CGCGCAACCT GCTCACCGTC
GAGAACGACG AGTCGCTGTT CGGCCTCGAC GCGGTGCTGC GGCTCGGCGA CCGGGTGCCG
GTGGTGCTCG ATCTCCACCA TCACTGGGTC GAGAGCCGCG GCGTCTATAT CGAGCCCGAC
GATCCCCGCA TCCCGGCGGT GATCGCCTCC TGGCGCGGTG TGCGGCCGGT GAGCCATATC
AGTGTTTCAC GGGAAACGGT CCTGCCCGAG CACGATACCG GCACGCTGCC GGACTACGCG
GCCCTGTCCG AACAGGGGCA TTCCTGGCGT GATCTGGCCG CCCATTCCGA CCTGATGTGG
AACGAGGCGG TCAACGCGCT CGTCGCCCGG CACCTCGCCT GGACCGATTT CGAGATCGAG
GCCAAGGGAA AGAACCAAGC GAGTGTGCCG CTCGCCGCCC GGATCGGCCG CGAATTCTCG
CAGGCGGCCG CGTGA
 
Protein sequence
MSRKPNPSQP NIAEPPRLGF CCTFIPDPDP AHKTLKAAKD AAKLMNLGTV TMAHLERLGP 
TARFEKLEGV VRHNLAALER QIAWVSARPP LERLLRMASS VLPGYTHPVA EPLYAQAPMR
ALIEAGLARI GEQARAGDVR LSMHPGPFCI IASRNPNAQK NGIAELEYHA EVMAMLGYGS
GWHPHGAHVN IHIGGREPGI EGFRESLSLI SETARNLLTV ENDESLFGLD AVLRLGDRVP
VVLDLHHHWV ESRGVYIEPD DPRIPAVIAS WRGVRPVSHI SVSRETVLPE HDTGTLPDYA
ALSEQGHSWR DLAAHSDLMW NEAVNALVAR HLAWTDFEIE AKGKNQASVP LAARIGREFS
QAAA