| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1534 |
|---|
| Symbol | |
|---|
| ID | 5831971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 1714139 |
|---|
| End bp | 1714864 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641367332 |
|---|
| Product | allophanate hydrolase subunit 1 |
|---|
| Protein accession | YP_001639004 |
|---|
| Protein GI | 163850961 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2049] Allophanate hydrolase subunit 1 |
|---|
| TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.107979 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCACG ACGCGCCGCG GCTGCTGCCC TGCGGAGACA CGGCCTTCAC CATCGAGTTC
GGCTCAGGCA TCGATGCGCG CCTCAGCGCC CGCGTGCTGG CCCTCGATAC GGCGCTGGCG
GAGCGGGCCC TTCCCGGCGT GCTGGAGGCG GTGCCGACCT ACCGCTCGCT GACCGTCCAT
CTCGATCCGC TCCGCGCCGA CCCGGCCGAA CTCGGCCGCG CCGTCCTGGC GCTGGCGGGC
GAACCGCTCG CGGCGGTCCC GGCCCCGCGC TTGTGGCGCA TCCCCGTAGT CTATGGCGGC
GCGTTCGGGA TCGATCTCGA CGCGGTCGCC GCCCATCACG GGCTCACGCC CGAACAGGTG
ATCGCGCGCC ACAGCGCCCC CGAATACCGG GTCGCGATGA TCGGCTTCCT GCCGGGCTAC
GCCTATCTCG AAGGGCTCGA TTCCGGGCTC GCCCTGTCGC GCCGCCCCAG CCCGCGCCCG
GTGACGCCGG CCGGCACCAT CTCCATCGGC GGCGCCCAGG CGCTGGTGGC GAGCATCGCG
GCCCCGAGCG GTTGGCATCT TCTCGGGCGA ACCCCCGAAA AGACCTTCGT GCCCGAGCGC
GACCCCGTCT TCCTGCTCCG CCCTGGCGAC CGGGTGCGCT TCGTCCCGAC CCCGGCCGAG
CGCTGGGACG CGCTCGCCGC CGCGGCGGAG GCCGGCGAAC CGGTGGCCGA GTTGTGCGCG
GGATGA
|
|---|
| Protein sequence | MTHDAPRLLP CGDTAFTIEF GSGIDARLSA RVLALDTALA ERALPGVLEA VPTYRSLTVH
LDPLRADPAE LGRAVLALAG EPLAAVPAPR LWRIPVVYGG AFGIDLDAVA AHHGLTPEQV
IARHSAPEYR VAMIGFLPGY AYLEGLDSGL ALSRRPSPRP VTPAGTISIG GAQALVASIA
APSGWHLLGR TPEKTFVPER DPVFLLRPGD RVRFVPTPAE RWDALAAAAE AGEPVAELCA
G
|
|---|
| |