Gene Mext_1477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1477 
Symbol 
ID5832912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1654139 
End bp1655041 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content69% 
IMG OID641367277 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_001638949 
Protein GI163850906 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.72081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATTC CGTTCTCCCT CCGGCGCGCG AGCGCCCTCG CGCTGATGCT CACCTTGCCG 
GGCGCCGTCC TGGCTCAGGC GCCTGCGGGC CAGAAGACGC CCAGCGCGCC CGCTCCCATC
CCGGCGGCGG TTCCGCCGGA GACGGTGGTG GCGCGGGTCA ACGGTCAGGC GATCACCGCC
GCCGACCTCG CGATCGCTGC CGAGGATCCG GCGCTGTCGC TGCCGGGCGT CGACGAGGGG
GCTAAGCAGA ACCTGCTCGT CGATTACATG GTCGATCTCA AGGTCGGCGC GCAGGCGGCC
GAGTCTGCCG AGGTCGGCGA CGCGCCCGAG TTCAAGCGCA AGCTCGCCTA CTTCCGCGAC
AAGCTCCTGC TCGACGACTA CCTCGAGCGC GAGGCCAAGA AGGCGGTGAC GCCCGAGGCC
GCCAAGGCGC TCTACGAACA GACCGTGAAG TCGATGAAGC CCGAGGAGGA GGTGCGGGCC
CGCCACATCC TCGTCGAGAG CGAGGACGAG GCGAAGAAGA TCGCCGCACG CGTCAAGGGT
GGCGAGGATT TCGCCAAGAT CGCGGGCGAG GTCTCGAAGG ACCCCGGTTC CAAGACCGAG
GGCGGCGATC TCGGCTGGTT CAGCCAGGAG CGGATGGTGA AGCCCTTCGC CGACGCCGCC
TTCAAGATGA CGCCGGGGCA GGTCTCCGAT CCGGTGAAGA CCCAGTTCGG CTGGCACGTG
CTGCGCGTCG AGGAGAAGCG GACGAAGCCG GTGCCGACCT TCGACGAGAT GAAGGAGCAG
ATCGACCAGT ACCTCACCCG CAAGGCGCAG CAGGACACGA TCGTGAAGCT GCGCGAGGCG
GCCAAGGTCG AGCGCGCCGG CAGCACCGCG ACGCCGGCCG CGGGTGAGAC CAAGAAGCCC
TGA
 
Protein sequence
MPIPFSLRRA SALALMLTLP GAVLAQAPAG QKTPSAPAPI PAAVPPETVV ARVNGQAITA 
ADLAIAAEDP ALSLPGVDEG AKQNLLVDYM VDLKVGAQAA ESAEVGDAPE FKRKLAYFRD
KLLLDDYLER EAKKAVTPEA AKALYEQTVK SMKPEEEVRA RHILVESEDE AKKIAARVKG
GEDFAKIAGE VSKDPGSKTE GGDLGWFSQE RMVKPFADAA FKMTPGQVSD PVKTQFGWHV
LRVEEKRTKP VPTFDEMKEQ IDQYLTRKAQ QDTIVKLREA AKVERAGSTA TPAAGETKKP