| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1468 |
|---|
| Symbol | |
|---|
| ID | 5834569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1644257 |
|---|
| End bp | 1645786 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641367268 |
|---|
| Product | F0F1 ATP synthase subunit alpha |
|---|
| Protein accession | YP_001638940 |
|---|
| Protein GI | 163850897 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.184879 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCC GCGCCGCCGA GATCTCCGCG ATCCTGAAAG AGCAGATCAA GAATTTTGGC
CAGGAGGCCG AGGTCACGGA AGTCGGGCAG GTGCTCGCGG TCGGCGACGG CATCGCCCGC
GTCTACGGCC TCGACAACGT CCAGGCCGGT GAGATGGTCG AGTTCGAGTC GGGCGTGCGC
GGCATGGCCC TCAACCTCGA GCAGGACAAT GTCGGCGTCG TGATCTTCGG CTCCGACCGT
GAGATTAAGG AAGGCCAGAC CGTCAAGCGG ACCGGCTCCA TCGTGGACGT GCCGGTCGGC
AAGGGTCTGC TCGGCCGCGT GGTCGACGGC CTCGGCAACC CGATCGACGG CAAGGGCCCG
ATCCAGTCGA CCGAGCGTCG CCGCGTCGAC GTGAAGGCGC CGGGCATCAT CCCGCGCAAG
TCGGTGCATG AGCCGATGTC CACCGGCCTC AAGGCGATCG ACGCCCTGAT CCCGGTCGGC
CGCGGCCAGC GCGAGCTGAT CATCGGCGAC CGCCAGACCG GCAAGACCGC CATCGCGCTC
GACACCATTC TCAACCAGAA GTCGGCCCAT GCCGGCGCGG ACGAGAACGC CAAGCTCTAC
TGCGTCTACG TCGCCATCGG CCAGAAGCGC TCGACGGTGG CCCAGTTCGT GAAGGTGCTG
GAGGACCAGG GCGCCCTGGA ATACTCCATC GTCATCGCCG CCACCGCCTC GGACGCCGCG
CCGATGCAGT TCATCGCGCC GTTCGCCGGC TGCGCCATGG GCGAGTATTT CCGCGACAAC
GGCATGCACG CCGTGATCGT GTATGACGAC CTGTCCAAGC AGGCCGTGGC CTACCGCCAG
ATGTCGCTGC TGCTGCGCCG CCCGCCGGGC CGCGAAGCTT ACCCCGGCGA CGTGTTCTAC
CTCCACTCGC GCCTGCTCGA GCGCGCCGCC AAGATGGGCG ACGCCGCCGG CAACGGATCG
CTCACCGCGC TTCCGGTGAT CGAGACCCAG GCCAACGACG TCTCGGCCTA CATCCCGACC
AACGTGATCT CGATCACCGA CGGCCAGATC TTCCTCGAGA CCGACCTGTT CTACCAGGGC
GTCCGCCCGG CGGTGAACGT CGGCCTCTCG GTCTCGCGGG TGGGCTCCTC GGCCCAGACC
AAGGCGATGA AAAAGGTCGC CGGCAAGATC AAGGGTGAGC TGGCGCAGTA CCGCGAGATG
GCGGCCTTCG CGCAGTTCGG CTCGGATCTC GACGTCTCGA CCCAGCGTCT GCTCAACCGC
GGCGCGCGCC TCACCGAGCT CCTGAAGCAG CCGCAATTCT CGCCGCTGAA GATGGAAGAG
CAGGTCGCGG TGATCTACGC CGGCGTCAAC GGCTACCTCG ACAAGCTTCC GGTGGGCAAG
GTCCGCGCCT TCGAGGAGCA GCTCCTCGGC ACCCTGCGCT CCAAGCACCA GGATTGGCTG
AACGCCGTGC GCGACTCCAA GGACCTGTCG GACGCCAACG CCAACACGCT CAAGGGCGTG
GTCGAGGCCA CCGCCAAGTC GTTCGCTTAA
|
|---|
| Protein sequence | MDIRAAEISA ILKEQIKNFG QEAEVTEVGQ VLAVGDGIAR VYGLDNVQAG EMVEFESGVR
GMALNLEQDN VGVVIFGSDR EIKEGQTVKR TGSIVDVPVG KGLLGRVVDG LGNPIDGKGP
IQSTERRRVD VKAPGIIPRK SVHEPMSTGL KAIDALIPVG RGQRELIIGD RQTGKTAIAL
DTILNQKSAH AGADENAKLY CVYVAIGQKR STVAQFVKVL EDQGALEYSI VIAATASDAA
PMQFIAPFAG CAMGEYFRDN GMHAVIVYDD LSKQAVAYRQ MSLLLRRPPG REAYPGDVFY
LHSRLLERAA KMGDAAGNGS LTALPVIETQ ANDVSAYIPT NVISITDGQI FLETDLFYQG
VRPAVNVGLS VSRVGSSAQT KAMKKVAGKI KGELAQYREM AAFAQFGSDL DVSTQRLLNR
GARLTELLKQ PQFSPLKMEE QVAVIYAGVN GYLDKLPVGK VRAFEEQLLG TLRSKHQDWL
NAVRDSKDLS DANANTLKGV VEATAKSFA
|
|---|
| |