Gene Mext_1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1462 
Symbol 
ID5835793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1638606 
End bp1639286 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content71% 
IMG OID641367262 
ProductNUDIX hydrolase 
Protein accessionYP_001638934 
Protein GI163850891 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.205145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0719668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCTGT CCCAGGCGGC CGGGCCCGTG GCGGACGGGC TCGCGGAGGA TTTCGGCCTC 
GACGCCTTCC TCGCGCGGGC GGAAACCCGC TTGAGCCACG TGCCGCCGGG GCCGGGCGTG
CCGCTGTCGA ACCCGCGCGG CGACCACGAC CTCCAGCCGG AGGGTTTTTC CGTTGCGCCG
GCCACGCCGC ACCGGCCGGC GGCGGTGCTG GTGCCTGTGA TCGACCGTCC CGAGGGACCG
ACGCTGCTGT TCACGAAGCG GGCAGCGCAC TTACGCGACC ATTCGGGGCA GGTCGCCTTT
CCCGGCGGCA AGGTCGATCC CGAGGACACC ACGCCGATCG ACACGGCTTT GCGCGAGGCC
TGGGAGGAGA TCGGGCTTGA GAGCGACGCC GTGCGCCCGC TCGGCTATCT CGATCCCTAT
CTCTCCGGCA CCGGCTTCCT CGTCATGCCG GTGGTCGGGC TCGTGGCGCG CGACGCCGTG
CTGCGGCCGA ACCCGGCGGA GGTGGCGGCC GTGTTCGAGG TGCCGCTCGC CTTCCTCATG
GACCCGGCGC GGCATCTCGT CCGTTCGGCG GAATGGAAGG GACGGACGCG CTATTTCTAC
GCCATCCCCT TCGCCGAGCA CCTGATCTGG GGCGTCACGG CAGGGATCGT GCACAACCTC
CAAGAACGCC TTTATCCCTG A
 
Protein sequence
MRLSQAAGPV ADGLAEDFGL DAFLARAETR LSHVPPGPGV PLSNPRGDHD LQPEGFSVAP 
ATPHRPAAVL VPVIDRPEGP TLLFTKRAAH LRDHSGQVAF PGGKVDPEDT TPIDTALREA
WEEIGLESDA VRPLGYLDPY LSGTGFLVMP VVGLVARDAV LRPNPAEVAA VFEVPLAFLM
DPARHLVRSA EWKGRTRYFY AIPFAEHLIW GVTAGIVHNL QERLYP