Gene Mext_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1425 
Symbol 
ID5833829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1598340 
End bp1598750 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content69% 
IMG OID641367225 
ProductTP901-1 family phage major tail protein 
Protein accessionYP_001638897 
Protein GI163850854 
COG category[S] Function unknown 
COG ID[COG5437] Predicted secreted protein 
TIGRFAM ID[TIGR02126] phage major tail protein, TP901-1 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0384204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.214257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC AGAGAGGCAG GGACCTCCTG GTCCGAGTCA GTAACGGGGC CGGCGGCTTC 
GCCGCGGTGG CGGGCCTGCG CGCCCGGCAA CTCGCCTTCA ACGCTGAGAC GGTGGACGTC
ACCAACGCCG ATTCCGCCGG GCGCTGGCGC GAGCTGCTGG CCGGCGCAGG TGTGCGCCGC
GCCGCGGTCG CCGGATCAGG TGTGTTCCGC GACGAGGCCT CCGATGCACG CCTGCGCCAG
ATGTTCTTCG ATGGCGTGAT CGGCCTGTTT CAGATCGTGG TGCCGGATTT CGGCACGATC
GAGGGCCTGT TCCAGATCAC GAGCCTTGAG TATCGCGGCG AGCATGCGGG CGAGGTGACC
TTCGACATGG CCCTCGATTC CGCCGGCCCC TTGAGCTTCG CGGGGGCATG A
 
Protein sequence
MSAQRGRDLL VRVSNGAGGF AAVAGLRARQ LAFNAETVDV TNADSAGRWR ELLAGAGVRR 
AAVAGSGVFR DEASDARLRQ MFFDGVIGLF QIVVPDFGTI EGLFQITSLE YRGEHAGEVT
FDMALDSAGP LSFAGA