Gene Mext_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1422 
Symbol 
ID5832612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1597158 
End bp1597784 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content75% 
IMG OID641367222 
Productgene transfer agent (GTA) orfg11 
Protein accessionYP_001638894 
Protein GI163850851 
COG category[S] Function unknown 
COG ID[COG5281] Phage-related minor tail protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0992875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.120159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA GCGACCGCAG CACGGCCGAG CGCGCCAGGC AGCTCGAAAC CCTCGACCGG 
CTGGCCCAGC GCTTCGGCCA CAGCCTGTCC TCGGCCTTCG ACCGCAATCT CAATGCCGGG
CGCCAGCTCG ACGGCGTGCT GGCCTCGCTG GCGAGCAAGC TCTCCAACGT CGCGGTCAAG
GCGGCGCTGG CTCCGGTCAA GGCGGGCGTG ACGAGTCTCG TCAACAGCCT GCTGAGCGCG
GCCTCCGAGG GCGGCGGCAC GACGGCGCTC GCTAAAGGCG GCATCGTCTC CGATGGGCGG
ATCGTGCCGT TCCGCCTTGG CGGCGTTCTC GGCGGGGGAC GGGTGCGCCC CTTCGCGGCC
GGCGGGGTCG TGGCGGCGCC GACCTACTTT CCGCTTGCCG GCCCTGGGGG CGACGCCGGC
CTGATGGGCG AGGCCGGGCC GGAGGCGATC CTGCCGCTCA GGCGCGGCAG CGACGGCCGT
CTCGGCGTCG CGGCGGGCGG GGCCGAGCGT CCGGTCGCGG TCACCGTCAA CATCGCCACC
CCGGACATCG AGGGTTTCCG CCGCTCCGAG GCCCAGATCG CTGCCCGCCT CGCCCGCGCC
GTGGCACGCG GCCGACGGGC GCTCTGA
 
Protein sequence
MTDSDRSTAE RARQLETLDR LAQRFGHSLS SAFDRNLNAG RQLDGVLASL ASKLSNVAVK 
AALAPVKAGV TSLVNSLLSA ASEGGGTTAL AKGGIVSDGR IVPFRLGGVL GGGRVRPFAA
GGVVAAPTYF PLAGPGGDAG LMGEAGPEAI LPLRRGSDGR LGVAAGGAER PVAVTVNIAT
PDIEGFRRSE AQIAARLARA VARGRRAL