| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1408 |
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| Symbol | |
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| ID | 5832199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 1582846 |
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| End bp | 1584504 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641367208 |
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| Product | cytochrome c-type biogenesis protein CcmI |
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| Protein accession | YP_001638880 |
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| Protein GI | 163850837 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.381184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.031966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCACCCG GAAGCGATGT CGTGCGGGCC CCGCTCGGGC TCTACACGGG GCCGAGCTTA
AAAACTTTGG GTCTGATGAC GGCGATCTGG TTCATCCTGG CGGCCATGAC CGGCGCAGCC
GTGTTCGCGC TGCTTTGGCC GATGTCGCGC CGCCGCCGGC AAGGGGTCGG TCCGGAGGCG
GAGGGCGGCG ACGGGCTCGC CACCGAGACC GGCTTCTACG AAGACCAACT CGCCGAGATC
GAGCGCGATC TCGGCCGTGG CCTCATCGCC CCGGCGGAGG CCGAGGCCGC GCGCGCCGAG
GCCGCGCGTC GGCTGCTGCG GGCGAGCCGC GAGGAGCGGG CGGACGGGTC GGGCGCCGCG
CCGATCGCCG AGCCGCATCT GCGCCAGCGC CGGGCGGCTT CCGCCTTCGC GCTGTCCACG
ATCCCGCTGG TCGCGCTCGT CGTCTACGGC CTCTACGGCT CTCCGAATCT CCCGTCGCAG
ACCGACGCCG ACCGCAAGGC GACGCGGGCC GGCGCGCAGG ATCTGATGAC CGCCATCGGC
CAGATCGAGG CGCGGCTCGC CAACCACCCG GACGACGTCC GCGGCTGGAG CGTGCTCGGG
CCGGTCTATA TGCGGCTCGG GCGGTTCGAC GACGCGGCCC GTGCCTACGC GGCGCTCGTC
CGCCTCAAGG GCGAGGACGC CCAGGCGCTG TCGGATTGGG GCGAGGCCCT GGTCGCGGCG
GCCGACGGCA CGGTCTCGCC GGAGGCGCGC AAGGTGCTGG GCCGGGCGCT CACCGCCGAT
CCGAAGGCGG CTAAGCCCCA GTTCTATCTC GCCCGCGGCG ACGAGCAGTC CGGTGACGTG
GCCGGCGCCG TGCGGCGGTT GGAGGCGATG GCGGCCTCCG CCCCCGCGGA TGCACCCTGG
CTGCCGACGG TGCGCGACAA CCTCGCCCGG CTGAAGGGCG AGACCATGGC CGCGCCGAAG
GCCGAAGGGG AGGCCGGGGA GGGCGCCCGG GATCGAGCCA AGGACGGCGC CAAGGACGGG
GCCAAGGATG GGACAATGTC CGAGGCGCCG GTGGCCGGGC CGGGCAGCAA CATCCAGGCG
CTGCCGCCCT CCGAACGGAT CGACGCGATC CGCGGCATGG TCGAGGGGCT GGAACGGCGC
TTGGCCAAGC AGGGCGGCAG CGCCGACGAG TGGCTGCGCC TCGTGCGCTC CCACGCGGTG
CTCGGCGAGC GCGACAAGGC GCTCGACGCG TTGGAGCGCG GGCGCAAGGC GTTTCCCGAC
GATAAGGAAG CGCAGGCGCG TTTCGATGCG CAGGCCCACG AACTCGGCCT CGCCGGGGCC
GGGACGCCAC CGCCGAAGGC GGAGAACAGC GAAAAGCCCG GTGAGCGGAA TGCGGCCGAG
CCCGACACGG CCGCCAACGC GATCCGGGCG ATGCCGCCAG CCGAGCGCGA GGCGGCGATC
CGCGGCATGG TCGCCAGCCT CGACCGGCGG CTCGCCGCCA AGGGCGGCAG CGCCGACGAG
TGGATGCGGC TCGTGCGCTC CTACGGTGTG ATCGGCGACC GGGCCGCCGC AGCCCAAGCC
CTCGACCGGG CCAGGATGGC GCTCGCCGCC AACCCGAAAG CGGTCGAACG CCTCGACGCG
CTCGGCAAGG AACTCGGTCT GACGCCCGCT CAGCCGTAG
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| Protein sequence | MSPGSDVVRA PLGLYTGPSL KTLGLMTAIW FILAAMTGAA VFALLWPMSR RRRQGVGPEA
EGGDGLATET GFYEDQLAEI ERDLGRGLIA PAEAEAARAE AARRLLRASR EERADGSGAA
PIAEPHLRQR RAASAFALST IPLVALVVYG LYGSPNLPSQ TDADRKATRA GAQDLMTAIG
QIEARLANHP DDVRGWSVLG PVYMRLGRFD DAARAYAALV RLKGEDAQAL SDWGEALVAA
ADGTVSPEAR KVLGRALTAD PKAAKPQFYL ARGDEQSGDV AGAVRRLEAM AASAPADAPW
LPTVRDNLAR LKGETMAAPK AEGEAGEGAR DRAKDGAKDG AKDGTMSEAP VAGPGSNIQA
LPPSERIDAI RGMVEGLERR LAKQGGSADE WLRLVRSHAV LGERDKALDA LERGRKAFPD
DKEAQARFDA QAHELGLAGA GTPPPKAENS EKPGERNAAE PDTAANAIRA MPPAEREAAI
RGMVASLDRR LAAKGGSADE WMRLVRSYGV IGDRAAAAQA LDRARMALAA NPKAVERLDA
LGKELGLTPA QP
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