| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1396 |
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| Symbol | |
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| ID | 5831484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1569775 |
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| End bp | 1572078 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641367196 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_001638868 |
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| Protein GI | 163850825 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00279545 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCTCCG ACGCAGATCC CCTCTCCCCG CACGCGGGGA GAGGGCCGAG CCCCCCTCGT
CGGGGGCTCG GCGAGGCGGC AGCCGAGGGT GAGGGGGCGG TTCCGAAAGA GGCTCATCCT
GAGCCGCCCC CTCACCTTCG CTCCGGCTGC GCCTCCGCTT CCAGCCTGCA CGACAAGGTG
CAGTCTGGCC TCTCCCCGCG CGCGGGGACC CTCTCCCCGC GCGCGGGGAG AGGGGGGCGC
GTCGGCACGG TTCTCGCCCT CTTCGTCATC GTCGCGCTTC TGCTGGCGGG CGCCCTCTGG
CGCTACGCCG CGACGCTCCC GCCCCTCGAC CTGACCCAGG CCTCGCTCCG CTCCACCGTC
ATCCTCGACC GGAAGGGCCA GCTGCTGCGC CCCTTCGCCA CCGCCGACGG GCGCTGGCGC
CTGCCCGTCA GCGCGGACGC GATCGATCCG CGATACCTCG CCATGCTCAA GGCCTACGAG
GATCGCCGCT TCGACAGCCA TCCCGGCATC GATCCGGCGG CGACGCTCCG CGCAGCGTGG
CAATGGCTCG CCCATGGAAA AATCGTGTCG GGCGGCTCGA CGCTGTCGAT GCAGGTCGCC
CGCCTCGTCG AGCCGCGGGC CGAGCGCTCG CTCCCCGCAA AGCTCCGGCA GATGGTCCGC
GCGGTCGAAC TGGAGCGTAC ACTCGGCAAA GCGGGCGTGC TCAACCTCTA TCTCGCGCTC
GCCCCCTATG GCGGCCCGGT CGAGGGCGTG CGGGCGGCAA GCCTCGCCTA TTTCGGTCGC
GAGCCGGCCC GTTTGTCGTT TGCCGAGAGC GCGCTCCTCG TCGCCCTGCC GCAATCACCG
GAGGCCCGCC GGCCCGACCG CTTCGCCGCC AATGCGCGGC GCGCCCGCGA CCGGGTGCTC
GACATCGCCG CCGAGCGCGG CGTGCTGACC GCCGCCGAAG CGCAGGCCGC CAAGGCGGAG
CCGGTGCCAG TTGCGCGAAA ACAATTCCCG ATGCTCGCTG CCCACGCCGC CGAGCAGGCC
CACGCCGCCG ACCCGGACGC GCGGGTGCAG CATCTGACAC TCGACGCGCG CCTTCAGGCG
AGCCTCGAGG CGCTGGCGAC CGAGCGCGCG ACTGCCGCCG GTCCGGCCCT CTCCGCCGCG
ATCCTCGCCA TCGACAACCG AACCGGCGCG GTGCTCGCCC ATGTCGGCAG CGCCGGCTAT
CTCGACGCCG CCCGCGCCGG TGCCGTCGAT GCCACGCAGG CGGTGCGCTC GCCGGGCTCG
GCGCTCAAGC CCTTCATCTA CGCGCTCGCC TTCGAGGACG GGCTCGCCCA CCCCGAAACG
CTTCTCGACG ACCGCCCGGC GCGCTTTGCC GCGAGCTACG CCCCGGAAAA CTTCGACATG
GGGTTTCGCG GCACGGTCAC GGCGCGGGTC GCACTTCAGC AATCGCTGAA CCTGCCCGCA
GTCGAACTTT TGGACGCGGT CGGCGCCGCC CGTTTCGTCG CGCGGCTGCG GGGCGCTGGC
GCGACGATCC TGCTGCCGCG CGACACGGCG CCGGGCCTGC CCGTGGCGCT CGGCGGGCTC
GGCATCACGC TCACCGACCT CGCCCGGCTC TATGCGGGAC TCGTCCGCTC CGGCACCGTG
CCGGCGCTGA CCCGGCGCCT CGACGGGCCG CCGGCCGCGC CCGAGCCGGA GTGGCGGGTC
GCCGATCCGG TGGCCGCCTG GTACGTCGCC GACATCCTGC GCGGCGCCCC GCCGCCGGAG
AACGCCCTGC CCGGCCGGAT CAGCTTCAAG ACCGGCACCT CCTACGGCTA CCGCGACGCC
TGGGCGGTGG GCTTCGATGC CCGTGTGACC ATCGCCGTCT GGATCGGCCG CCCCGACGGC
GCCTCGGTGC CGGGGCTGGT CGGGCGCAGC CACGCCGCCA CGATCCTGTT CGACGCCTTC
GCCCGGTTCG GCGGCGAGCC GGAGGCGCTT CCCCGGCCCC GCGACGCCCT CGTCGCCACC
ACCGCCAACC TGCCCCCACC GCTGCGCCAC ATCCGCCGGG ATGCGCCGAA AACCTTCGCG
GCGACGCTCG GCGTGCCGCT CAAGATCGCC TACCCGCCGG ACGGTGCCCG GGTCGATCTC
GGTTTGAGCG AAGGCGCGCA GGCCCGCCTC GCCCTCAAGG CGCTGGGCGG CCAGCCGCCG
CTGACCTGGA TGGTCGACGG CCTGCCCGTG GCCGAGGCGA TGCGCCGGCA ATCGGAATGG
AGCCCGGAGG GCGCAGGCTT CGCCCGGATC TCGGTGATGG ACGCGGCGGG TGCGAGCGAC
AGCGTGGTGG TGCGGCTAGA ATAG
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| Protein sequence | MASDADPLSP HAGRGPSPPR RGLGEAAAEG EGAVPKEAHP EPPPHLRSGC ASASSLHDKV
QSGLSPRAGT LSPRAGRGGR VGTVLALFVI VALLLAGALW RYAATLPPLD LTQASLRSTV
ILDRKGQLLR PFATADGRWR LPVSADAIDP RYLAMLKAYE DRRFDSHPGI DPAATLRAAW
QWLAHGKIVS GGSTLSMQVA RLVEPRAERS LPAKLRQMVR AVELERTLGK AGVLNLYLAL
APYGGPVEGV RAASLAYFGR EPARLSFAES ALLVALPQSP EARRPDRFAA NARRARDRVL
DIAAERGVLT AAEAQAAKAE PVPVARKQFP MLAAHAAEQA HAADPDARVQ HLTLDARLQA
SLEALATERA TAAGPALSAA ILAIDNRTGA VLAHVGSAGY LDAARAGAVD ATQAVRSPGS
ALKPFIYALA FEDGLAHPET LLDDRPARFA ASYAPENFDM GFRGTVTARV ALQQSLNLPA
VELLDAVGAA RFVARLRGAG ATILLPRDTA PGLPVALGGL GITLTDLARL YAGLVRSGTV
PALTRRLDGP PAAPEPEWRV ADPVAAWYVA DILRGAPPPE NALPGRISFK TGTSYGYRDA
WAVGFDARVT IAVWIGRPDG ASVPGLVGRS HAATILFDAF ARFGGEPEAL PRPRDALVAT
TANLPPPLRH IRRDAPKTFA ATLGVPLKIA YPPDGARVDL GLSEGAQARL ALKALGGQPP
LTWMVDGLPV AEAMRRQSEW SPEGAGFARI SVMDAAGASD SVVVRLE
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