Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1394 |
Symbol | |
ID | 5833141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 1563827 |
End bp | 1564339 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641367194 |
Product | hypothetical protein |
Protein accession | YP_001638866 |
Protein GI | 163850823 |
COG category | [S] Function unknown |
COG ID | [COG3238] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.492463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00247418 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGACGGAC AGGTCCCGGG CGACAGCTTT GGCGCAGGAC TTCAAGGCAT TCGGAAGGGC GCGGCTTTGC TGCAGATCGG ATTGTACGGT GCGGCGGCGC TGGCGGGTGT CGCCTTCGTG GTCCAGCAGG CGGTCAATGC CGGGCTGAGG GGCGACCTCG GCTCCGGTCT CTGGGCGGGA TTCGTCAACT TCACCGTCGG CGGTCTCGCC GTCGGCCTCC TGGCGCTGAC CTTGCGCGAA TCCTTGCCCT CGCTCGACGC GGCCGCCCGC GCCCCCTGGT ACGCCTGGAC CGGCGGCCTG CTCGGCGCGG TCTACGTCGT CGGGGCGATC TTCCTGATCC CGCGCATCGG CGCCGCCGCG GTCGTCGCCC TCCTCATCGT CGGGCAGATG CTGATGTCGC TCGCCCTCGA CCATTTCGGG CTGCTCGGCG TGCCGGTCCA CGAAGCGAAC CTGCCGCGGC TCGGCGGCGC GCTGCTTCTG CTGGCCGGCG TCGCCCTGAT CTGCATCTTC TGA
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Protein sequence | MDGQVPGDSF GAGLQGIRKG AALLQIGLYG AAALAGVAFV VQQAVNAGLR GDLGSGLWAG FVNFTVGGLA VGLLALTLRE SLPSLDAAAR APWYAWTGGL LGAVYVVGAI FLIPRIGAAA VVALLIVGQM LMSLALDHFG LLGVPVHEAN LPRLGGALLL LAGVALICIF
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