| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1387 |
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| Symbol | |
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| ID | 5831740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1557375 |
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| End bp | 1558100 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641367187 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001638859 |
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| Protein GI | 163850816 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000495058 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCACG CCTTCGACGC GGCCTCGGCC GCCTCCGAGA CGAAACGCGC CGAGGAGCCG
CGGATTCCGG GCCTGCTCGG CGTGATCGAG CGGACCACGC GCCGGCTCAA CCACGTCATC
CTGGTGTGCG GCGGGGTGGC GCTCGTCGCC GCCTGCCTCG TGCTCAGCTA CTCCGTCCTG
ACCCGCTACG TCTTCCACGA GCCGACCGAG TGGCAGGACG AGACCGCCGT GTTCCTCATC
GTCGGCGCGA CCTTCCTGTC GGCGGCGGGC GTTCAAGCCA AGCGCGGCCA CGTCGCCATC
GAGGCCCTCA CCGGCCTGCT GTCGCCGGGC GTCAACCGGG TGCGCCTGAT CTTCGTCGAC
ATCGTCAGCC TCGCCTTCGT GACCTTCTTC GCCTGGAAGA GCTGGAGCCT GTTCCACGAG
GCCTGGGAAG ACGGCCAGAT CTCGCAATCG ACCTGGGGGC CTCCGCTCTG GATTCCCTAC
CTGCTGATGG CCGCGGGCAT GAGCCTGCTC GCCGTCCAGT TCGTCCTGCA GATCACTGAA
GCCGTCCTCT ACGGCCCCCG CGCTGCCGGC TGGGCCAAGC CGAAGATCGG CATCGGGGCG
GACGTCAACC GCGACATGCG CGACCGCCCG GATCTGACGC CCGAGGGGCC GGATCCCCTG
GAGAGCACGA TTAAACCGAC AGCGGCCCCG GTTCGGCCGA TCACGACGAG GGGAGGCAAG
GCATGA
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| Protein sequence | MSHAFDAASA ASETKRAEEP RIPGLLGVIE RTTRRLNHVI LVCGGVALVA ACLVLSYSVL
TRYVFHEPTE WQDETAVFLI VGATFLSAAG VQAKRGHVAI EALTGLLSPG VNRVRLIFVD
IVSLAFVTFF AWKSWSLFHE AWEDGQISQS TWGPPLWIPY LLMAAGMSLL AVQFVLQITE
AVLYGPRAAG WAKPKIGIGA DVNRDMRDRP DLTPEGPDPL ESTIKPTAAP VRPITTRGGK
A
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