| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1369 |
|---|
| Symbol | |
|---|
| ID | 5831228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 1525352 |
|---|
| End bp | 1526611 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641367162 |
|---|
| Product | cellulase |
|---|
| Protein accession | YP_001638841 |
|---|
| Protein GI | 163850798 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3405] Endoglucanase Y |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.140068 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0392414 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCCCC CCCGCACCCC GCGCCGCATC GGATGGGCTT TCGCCTCGGC GCTCGCCCTC
GCGGCGGCCG GATCCGCCGC GGCACAGACG ACCCCGCAGC CGGCATCCCC ACAGCCGGCC
TCCCCGGAGA CGTCGTCCCA AATGCCTCAG CCCGCGCCTC AGCCCGCGCC CCAGCAGACG
GAGGCCACCA CGGTGCCCCC CGCCACGGCC CTGCCGGGCC CGCCGCGCGC CGAGACGTCG
GCGCGGACCG ATTCCGGGCC GCTCCTCGCC AACACCCTGG GCGACGACGC GGCATGGCGC
GCCTACCGGT CGCGGTTCAT CACCGAGCAG GGCCGGATCG TCGATACCGC CAACGGCCTG
ATCAGCCACA GCGAGGGCCA GGGCTACGGC ATGCTGCTCG CGGTCGCGGC CGGCGACCGG
TCCACCTTCG AGCGGATCTG GGGCTGGACC CGCGCCAACC TCATGGTGCG CTCCGACGAA
TTGCTGGCAT GGCGCTGGGC GCCCGACCAC CGCCCGGCGG TCTCCGACAT GAACAACGCC
ACCGACGGCG ACATCCTGGT CGCCTGGGCG CTCACCGAGG CAGCGGAGGC CTGGGGCGAA
CCCTCCTACC GCACCGCCGC GCGCCGCATC GCCGTCGAGT TCGGCCGCAA GACCATCCTG
TTCAAGGACC CGCACGGACC CGTCCTGCTG CCGGCCGTCT CCGGCTTCTC GGCCCGCGAG
CGCGCCGACG GCCCGCTCAT CAACCTGTCC TACTGGGTCT TCCCCGCCTT CCAGCGGCTG
CCGATCGTCG CCCCGGAATA CGATTGGGCC TCGCTGATCC GCAGCGGCGT CGATTTCCTG
CGCCAGTCCC GCTTCGGGCC GAGCAGCCTG CCGACCGAGT GGATCTCGGC CAAGGACAGC
TTACGCCCCG CCGACGGCTT CCCGCCGCTA TTCTCCTACA ACGCGATCCG GGTGCCGCTC
TATCTCGCCT GGGCCGGCGT CGGGCGGCCG GAGGATTACG CGCCGTTCAA GACGCTCTGG
GGCGGGATCG AGCGCGAGCG CCTGCCGATC GTCGACACCC GCGACGGGCA GCCGGTCGAG
TGGCTGAGCG AGCCGGGCTA TATGGCGATC TCCGCGATCA CCGCCTGCGC CGCGGACGGA
ACACCCTTTC CGGAAGCCTT AAGGACGGTG CAGGACAATC AGAACTACTA TCCCGCCACC
CTCCAACTCC TCTCGCTGAT CGCGGCCCGG ATGCGGTATC CGTCATGCGT GAAATCCTGA
|
|---|
| Protein sequence | MRPPRTPRRI GWAFASALAL AAAGSAAAQT TPQPASPQPA SPETSSQMPQ PAPQPAPQQT
EATTVPPATA LPGPPRAETS ARTDSGPLLA NTLGDDAAWR AYRSRFITEQ GRIVDTANGL
ISHSEGQGYG MLLAVAAGDR STFERIWGWT RANLMVRSDE LLAWRWAPDH RPAVSDMNNA
TDGDILVAWA LTEAAEAWGE PSYRTAARRI AVEFGRKTIL FKDPHGPVLL PAVSGFSARE
RADGPLINLS YWVFPAFQRL PIVAPEYDWA SLIRSGVDFL RQSRFGPSSL PTEWISAKDS
LRPADGFPPL FSYNAIRVPL YLAWAGVGRP EDYAPFKTLW GGIERERLPI VDTRDGQPVE
WLSEPGYMAI SAITACAADG TPFPEALRTV QDNQNYYPAT LQLLSLIAAR MRYPSCVKS
|
|---|
| |