| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1361 |
|---|
| Symbol | |
|---|
| ID | 5832163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 1512094 |
|---|
| End bp | 1513248 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641367154 |
|---|
| Product | cytochrome d ubiquinol oxidase, subunit II |
|---|
| Protein accession | YP_001638833 |
|---|
| Protein GI | 163850790 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
|---|
| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0415626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.128096 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCCC TTCTCTCGGA CTACGAAAGC TTACGCCTGA TCTGGTGGGT GCTGCTCGGC
GTGCTGCTGA TCGGCTTTGC CGTCACCGAC GGCTTCGATC TCGGCGTCGG CGCCCTGCTG
CCCTTCGTCG GCCGCACCGA TGTCGAGCGG CGGGTGGCGA TCCACACCGT CTCCGCCACC
TGGGAAGGCA ATCAGGTCTG GCTGGTGCTC GGCGGCGGCG CGATCTTCGC CGCGTGGCCC
GCGCTCTACG CGCTGAGCTT CTCCGGCTTC TACCTCGCGA TGTTCCTCGT GCTGTTCGCC
CTGATCCTGC GGCCGGTGGC GTTCAAGTAC CGCTCAAAGC GGGCGAGCGC GGCTTGGCGC
TCCCGCTGGG ATTGGGCTTT GTTCGTCGGC GGCGCGGTGC CGGCGCTGAT CTTCGGGGTC
GCCGTCGGCA ACGTGCTCCA GGGCGTGCCC TTCCACTTCA CGGGCGACCT TCGCCCGATC
TACGGGGGCA GCCTGCTCGG CCTGCTCAAC CCGCTGGCGC TGCTCTGCGG CCTCGTCTCG
CTGGCGATGC TGGTGGCGCA CGGCGCCGCG TGGCTCGCCT TCAAGGCCGA GGGGCCGGTC
GCCGAGCGCG CCCGCGCCAT CGGGCTCAAG GCCGCGCTCG CCACCGCCGC CCTGTTCACC
CTCGGCGGCC TCCTGATCTG GGCCGGCGCC TTCGGCGGCT ACCGGGTGGT GAGCCCCCTC
CCCGGCGACG GCCCGTCCAA CCCGCTGACC AAGGCGGTCG TGGCGGATGC CGGCGCGTGG
CTCGCCAACT TTCGGGCCCA TCCGGCGCTC GCTCTGGTGC CGCTCCTCGG CATCACCGGC
CCGCTGCTGG CGGCCCTCGG CTTCCGCGCC CGGCACGAGG GGCTGACCTT CCTCGCCTCC
AGCCTCGGCA TCGCCTGCAT CATCGCCACC GTCGGCCTGT CGATGTTCCC GGTCATCCTG
CCCTCGAACA CGCATCCGGG CCACGCGCTG ACCGTGTTCG ACGCCTCCTC CAGCCGGGCG
ACCCTGCGCA ACATGCTGAT CGCGACGGTG ATCTTCCTGC CGATCATCCT CGTCTACACC
GCCTGGGTCT ACCGGGTGCT GTGGGGCAAG GTCTCGGATC GCGACATCAC CGCCCCCGGC
TCGGCCGCCT ACTGA
|
|---|
| Protein sequence | MLALLSDYES LRLIWWVLLG VLLIGFAVTD GFDLGVGALL PFVGRTDVER RVAIHTVSAT
WEGNQVWLVL GGGAIFAAWP ALYALSFSGF YLAMFLVLFA LILRPVAFKY RSKRASAAWR
SRWDWALFVG GAVPALIFGV AVGNVLQGVP FHFTGDLRPI YGGSLLGLLN PLALLCGLVS
LAMLVAHGAA WLAFKAEGPV AERARAIGLK AALATAALFT LGGLLIWAGA FGGYRVVSPL
PGDGPSNPLT KAVVADAGAW LANFRAHPAL ALVPLLGITG PLLAALGFRA RHEGLTFLAS
SLGIACIIAT VGLSMFPVIL PSNTHPGHAL TVFDASSSRA TLRNMLIATV IFLPIILVYT
AWVYRVLWGK VSDRDITAPG SAAY
|
|---|
| |