Gene Mext_1355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1355 
Symbol 
ID5831784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1504593 
End bp1505534 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content72% 
IMG OID641367148 
ProductUspA domain-containing protein 
Protein accessionYP_001638827 
Protein GI163850784 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.574813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCAC GGCGCGGGCC CCCTCGACCC GCCTTGCGCT GGATCAAGGC ACCCGTACCG 
GCCGGCGGCA AGGATGCCCC CATGAAGGAT GGCCCCACCG AGCGGAGGGG GACGCCCCGG
GAGGCGAGCA TGGCTTACGC GAACATCCTG GTCTCGGTCG ACCTCGACGA GGCCGCCACC
GACCGCATCC GGCTTGCGGC CGCTCTCGCG CGGCGCTTCG AGGCGACGCT CACGGGGGCG
GCCGCCTGCA AGGTACCGGC GCCGGATTAC GTGCGCGATA TCGGCGAGAT CTACGACGCG
GATCCGCATT TCGAGGAGAA GGCGCGCGCC CTGCTCGCAC AGGCGCACGC CCTGTTCGAG
CGCTCCACCG AAGCCCCGCT GCGCCGCGAT TGGCGCGAGG CCCTGGCGGG TCCGATCTCC
CATCTCGTGG AGCAGGCGCG GGCGGCCGAC CTGATCGTGG TGGGACGCCG CGGCTCGGAC
GACATCCCGC TCGGAACCCT CGGCGTGTCG CCCGGCCCCG TCCTGATGGA GGCCGCACGT
CCGGTCCTCG TGGTGCCCCC GCGCATCGAG CACCTTCGGG GCGCCCGGAT CGTCGTGGCC
TGGAAGGACG GCTCGGAGGC GCGCCGGGCC GTCTCGGCCG CGCTGCCCTT CATCCGCGAG
GCGGATCAGG TCTTCGTCGT CAGCACCGGC GAGGGGGCCC GCAACGAGGG CGCGGAGGAT
GTCGCCGGCC ATCTCGCCCG CCACGGCGCC GCCGTCACGA CCCACCTGCT GCGCACCGTC
GTGAGCGACG GCGACGAACT CCTGCGCTTT GCCGTCAAAC AGCAGGCCGA CCTCATCGTG
ATGGGCGCCT ACGGCCATAC CCGCCTGCGC GAGTGGCTGT TCGGCGGCGT CACCTACGAG
ATGCTGCACC GCAGCCCCCT CCCCTGCCTG ATGTGTCACT GA
 
Protein sequence
MSARRGPPRP ALRWIKAPVP AGGKDAPMKD GPTERRGTPR EASMAYANIL VSVDLDEAAT 
DRIRLAAALA RRFEATLTGA AACKVPAPDY VRDIGEIYDA DPHFEEKARA LLAQAHALFE
RSTEAPLRRD WREALAGPIS HLVEQARAAD LIVVGRRGSD DIPLGTLGVS PGPVLMEAAR
PVLVVPPRIE HLRGARIVVA WKDGSEARRA VSAALPFIRE ADQVFVVSTG EGARNEGAED
VAGHLARHGA AVTTHLLRTV VSDGDELLRF AVKQQADLIV MGAYGHTRLR EWLFGGVTYE
MLHRSPLPCL MCH