| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1329 |
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| Symbol | |
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| ID | 5833236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 1474202 |
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| End bp | 1477696 |
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| Gene Length | 3495 bp |
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| Protein Length | 1164 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641367122 |
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| Product | PAS sensor protein |
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| Protein accession | YP_001638801 |
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| Protein GI | 163850758 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.488954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCTCTG TTCTGGCCTC CATTGCCAAG CATGCCTTCG TCGTCGACGG CGGCGAGACG
GGCCGACTTG TCCGCTCGCG GGATTGGTCC GCGACCCCGC TCGGGCCGAT TGAGGGGTGG
CCGCCGACCC TGAAGACCGC GGTCAACATC ATGCTCACGT CGCCGGGTCC GGTCTCGATC
CTCTGGGGGC CTGAGCGCGT CCAGATCTAC AACGACGCGT ACATTCCGAT CGCGGCGGAG
CGGCACCCGG ACGCGCTTGG CCAGCCGGTG GCCCAGAATT GGAGCGACGC TTACGAGGCG
TTCCTCGCTC CCATCCTCGA TCGTGTGTTC GATGGCCAGA CGGTCCGGAT CGACGAGTAT
GCGGTGCCGC TGCGGACGCC GTCAGGGCGT GTCGAGCAGC GGTTCTTCAC CGGCAGCTTT
CAGCCCCTGC ATGATGAGAC CGGGACGGTC GAAGGTGTCT TTCATCCGCT CTCCGAGGTG
ACCGGCAACA AGGCGGCCGC GGAAGACCAG CGCCGCGCCG AACAGGCGCT GCGCGAGAGC
GAGATTCGCT ACCGACAGAT CGTCGAAGGT GCCGAAGACT ACGCGATCGT GCGCCTCGAC
GATCGCGGGA TCATCACCAC GTGGAACACG GGCGCGGAGC GTCTCACGGG CTTTACGGAG
CGCGATGCGA TCGGGGAGCC CGGAGATATC CTGTTCACCC CCGAAGATCG GGCCCTGGGC
CGGGCTGAGG CCGAGTTGAA CCGGGCGAGG AGCGACGGGC GAGCGCTGAA CGAACGCTGG
CACATGCGCA AGGACGGCAG CCGGTTCTGG GCCTCGGGGC TCATGATGCG TCTCGACGCG
GACGGCGGCA GCTATCTCAA CATGTTCCGC GACCGAACCG CCGAGCACGA GGCGGAGGCG
GCGCTGGCCG CCGAAGTCGC GGCGCTCGGG CGGCTGCAGG AGGTGAGCAC CCGGCTGGTC
GGCGACGAGG CTCCGCAGGC GCTCTACGAC GCGATCCTGA CCGCCGCCGC CGACCTGATG
GGGTCCGAAT GCGCAAGCAT CCAGATGCTG GATGCAGCCG GTGACCTCAA GCTTCTGGCG
CACCGCGGCT ACGATCCGCG CTCGGCGGCG TACTGGCAGA CGGTCGATGC GCGGTCCGAA
AGCACGTGCG GCATTGCGAT GACGACGGGC GCACGCGTGA TCGTGCCCGA CGTGGAGGAT
AGCGGCCTCG CCCACCGCAG CGGCGACCTT CAGTCCTACC GCTGGACGGG GATGCGCGCG
ATCCAGACGA CGCCGCTGTT GTCCCGTTCG GGCAAGCCCA TCGGCATGAT TTCGACGCAC
TGGAAACAGC CGTACACGCC TCCGGAGCGC GACCTCAAGC TCTTCGACGT GCTCGCCCGC
CAAGCGGCCG ACGCGATCGA ACGGACGTCG GCTCAGGCAA AACTGCGCGA AAGCGAGGCG
AGGCAGGCGT TCCTGCTTTC GCTCTCGGAC GCGATGCGCT CGCTCAAGAC GCCGGCGGAC
ATCGCCTCGC TGGCGGCCGA GCGTCTCGCC GAGCGTTTCA ACCTGAGCCG GGTGTTCTAC
GCCGAGTTCT TCGGCAGCCT GATGCGGGTC GAGCGCGACT ATACGAGGGG GGTCGGCTCG
CTCGTCGGTG AGCACGACCT GGCGGCGTTC GGACCGGACC TGCTGCGCGC CTATCACGAT
AGCCCGATCG TCAAGGTCGA TGACGTCCGC ACGGACCTGC GGTTCAGTGA GGATGCGCGA
TCGGGGCTCC TTGCCCGGCA AGTCGGGGCC TACCTCGATG TGGTGCTGTT CGAGCACGAG
CGGTGGGTGA GCGTGCTTGC CTTGCAGAGC GCCAAACCCC GGACTTGGAC ATCCTCCGAA
GAGGGTTTGT TCCGGGAGGT CGGCGAGCGC GTCAAAGCTG CCATCGAACG CGCGCGCGCC
GAGGATCGGC TTCGCGAGCT GAACGACACG CTTGAGCGGC GGGTCGCCGA GGCGCTTGCC
GAGCGTAACA TGCTCGCAAA GCTCGTCGAG ATGACCGACG TCATGATCAT GGCGATCGAT
CTCGACTACA ACATCCTCGC CATCAATGCC GCGAATGCCG ACGAGTTCGA GCGCATCTAC
GGTGTGCGCC CGAAGGCAGG CGACAACATC TTGGCGCTGC TCGCCGACCA GCCGGAGCAC
CAGGAGCAGG TGCGGATTGG CTGGGCCCAG GGCATGCGCG GCGAGCCGGT CACCTTCGTT
GAGGATTACG GCGACCCGAC CCGTGTCCGC CCCTATTACG AGGTGAACTT CCGGCCCCTA
CGCGACGAAA GCGGCGAGCT GGTCGGCTTC TACCAATTTG TGACCGACGT TACGGACCGC
TTGCGCCGGG AGGCGCAACT CGCCGAGGCG CATGACGCCC TGCGCCAGTC GCAGAAGATG
GAGGCGATGG GTCAGCTGAC CGGCGGCGTC GCGCACGACT TCAACAATCT GCTGACGCCG
ATCATCGGCT CGCTCGACAT GCTGCAACGA AAGCAGCTCG GAAATGAGCG CGAGCAGCGC
CTCATTGCCG GTGCGATGCA ATCGGCCGAG CGGGCGAAGA CGCTGGTCCA GCGGCTGCTC
GCGTTTGCGC GTCGTCAACC GCTGCAGCCG GTGCCGGTCA ATGTGGCGAA GCTGGTCACC
GGCATGGGCG CACTGGTCGC GAGCACCACC GGTCCGCAGA TCAAGATCGT GGTGGAGGCC
CCGGACGGCC TGCCGCCGGC CAAGGCCGAC CCGAACCAGC TCGAGATGGC GCTTTTGAAC
CTTGCCGTGA ATGCGCGGGA CGCCATGATG GAGGGCGGCG GCACGCTCCG CATCTCGACC
CGGGTGGAAG ACGTAAGAGC GGGTCATCGT ACCAAGCTAC GGCCCGGCCC GTACCTTTGC
TTGTCGGTCG CTGACACGGG CACCGGCATG GACGAGGCGA CGATCGCGCG CGCCGTCGAG
CCGTTCTTCT CGACCAAGGG CGTCGGCAAG GGGACGGGTC TCGGACTTTC GATGGTGCAT
GGGCTTGCGT CCCAGCTCGG CGGCGCGCTC GTGATCCAGA GCCGACCCGG GCTCGGCACC
AATATCGAGC TGTGGCTGCC GCAAAGCACG GCGGGGCAAG AGGCCGTCAG ACCCGCGGCT
GGGACGTCCG AGCTGCCGGC GACGCGCGGA ACGGCGCTGC TCGTCGATGA CGAGGAAGTC
GTGCGGATCA GCACGGCGGA TATGCTGACC GATCTGGGCT ACGCGGTGGT GGAAGCCACC
TCCGCGGAGG AGGCTCTCCG TCTTGTCAAC ACGGGCGAGC ACTTCGACCT TCTCGTGACC
GATCACCTGA TGCCGGGCAT GAGCGGAACC GATCTGGCCC GCGCGATACG GACGGCCAAA
CCTGGCATGC CCGTCCTGCT GGTGTCCGGC TACGCCGAGC GCGAGGGCGT GGACCCAGAC
CTGGCGCGGC TGAACAAGCC GTTCCGAAAG GACGAGCTCG CCTCGAGCCT CGCCCAGCTC
ATGACCGAAC ATTGA
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| Protein sequence | MASVLASIAK HAFVVDGGET GRLVRSRDWS ATPLGPIEGW PPTLKTAVNI MLTSPGPVSI
LWGPERVQIY NDAYIPIAAE RHPDALGQPV AQNWSDAYEA FLAPILDRVF DGQTVRIDEY
AVPLRTPSGR VEQRFFTGSF QPLHDETGTV EGVFHPLSEV TGNKAAAEDQ RRAEQALRES
EIRYRQIVEG AEDYAIVRLD DRGIITTWNT GAERLTGFTE RDAIGEPGDI LFTPEDRALG
RAEAELNRAR SDGRALNERW HMRKDGSRFW ASGLMMRLDA DGGSYLNMFR DRTAEHEAEA
ALAAEVAALG RLQEVSTRLV GDEAPQALYD AILTAAADLM GSECASIQML DAAGDLKLLA
HRGYDPRSAA YWQTVDARSE STCGIAMTTG ARVIVPDVED SGLAHRSGDL QSYRWTGMRA
IQTTPLLSRS GKPIGMISTH WKQPYTPPER DLKLFDVLAR QAADAIERTS AQAKLRESEA
RQAFLLSLSD AMRSLKTPAD IASLAAERLA ERFNLSRVFY AEFFGSLMRV ERDYTRGVGS
LVGEHDLAAF GPDLLRAYHD SPIVKVDDVR TDLRFSEDAR SGLLARQVGA YLDVVLFEHE
RWVSVLALQS AKPRTWTSSE EGLFREVGER VKAAIERARA EDRLRELNDT LERRVAEALA
ERNMLAKLVE MTDVMIMAID LDYNILAINA ANADEFERIY GVRPKAGDNI LALLADQPEH
QEQVRIGWAQ GMRGEPVTFV EDYGDPTRVR PYYEVNFRPL RDESGELVGF YQFVTDVTDR
LRREAQLAEA HDALRQSQKM EAMGQLTGGV AHDFNNLLTP IIGSLDMLQR KQLGNEREQR
LIAGAMQSAE RAKTLVQRLL AFARRQPLQP VPVNVAKLVT GMGALVASTT GPQIKIVVEA
PDGLPPAKAD PNQLEMALLN LAVNARDAMM EGGGTLRIST RVEDVRAGHR TKLRPGPYLC
LSVADTGTGM DEATIARAVE PFFSTKGVGK GTGLGLSMVH GLASQLGGAL VIQSRPGLGT
NIELWLPQST AGQEAVRPAA GTSELPATRG TALLVDDEEV VRISTADMLT DLGYAVVEAT
SAEEALRLVN TGEHFDLLVT DHLMPGMSGT DLARAIRTAK PGMPVLLVSG YAEREGVDPD
LARLNKPFRK DELASSLAQL MTEH
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