| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1316 |
|---|
| Symbol | |
|---|
| ID | 5834226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1460143 |
|---|
| End bp | 1461078 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641367109 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001638788 |
|---|
| Protein GI | 163850745 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.541831 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.727397 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCG GTCTCATCGT CCGTGCCCGG GCAAAACAGG CCGAGGACGC GCATCCGCCC
TTGGGCCGTT TCGTCGAGGC CGACGGCGTG CGCCTTCACT ATATCGAGTG CGGTGCCGGC
GAGCCGCTGG TCATCTTCCA CGGCAACGGG AGCATGGCGG AAGAATTCAT CCTCAGTGGC
TTCGTCACCT TGGCCGCGCA GCATTTCCGC GTCATCGTGT TCGATCGTCC GGGCTACGGC
TACAGCGAGC GCCCGCACAG CAAAGTCTGG ACGCCAGCAG CGCAAGCCGA CCTCTTGATC
GGTGCGCTCG CTCGGATTGG TGTCGACCGA GTGATCGCCC TCGGCCATTC CTGGGGCGCT
TCGGTTGCGA TCGCAGCAGC CCTACGCCAC CCAGACGCCG TTCGGGGGCT GGTTCTGGAG
AGTGGCTACT ACTATCCGTC ACCCCGTGCC GACCTTGCCC TGTTCTCGAT AGCGGCCCTC
CCGTTGATCG GTGACGTGCT GCGCTACACG GCATATCCGC TGACAGCGCG CCTGCTATGG
CCGATCATGC GGCGCAACCT GTTCAGCCCA GCTGCCGTCG CTCCGTCGTT TGAACGATTT
CCCTCATCGA TGGCGATGCG TCCGTCGCAG CTTCACGCGA GTGCGGCAGA GTCCGCCTTG
ATGGTTCCGA ACGCGGCGGT GCTCCAAAGG CACTATCGTA AGCTGAGGAT GCCTATCGCC
ATCATCGCCG GGATCGGTGA CAGGATGGTC GATGTTGACG GTCAATCACG TCGCCTCCAC
GGCGAGGTGC TGCAGAGTAG CCTGCACCTT GTGGAGGAGT GTGGCCACAT GGTTCATCAC
ACCGCACCGC ACAGAGTGTT GGCCGGTCTC GAAGAAGTTC GTCGGGCTGC CTGCGAGGCG
AGCGCCCGCC GAGAGACGTC GCTCCAAGCG ACGTAG
|
|---|
| Protein sequence | MATGLIVRAR AKQAEDAHPP LGRFVEADGV RLHYIECGAG EPLVIFHGNG SMAEEFILSG
FVTLAAQHFR VIVFDRPGYG YSERPHSKVW TPAAQADLLI GALARIGVDR VIALGHSWGA
SVAIAAALRH PDAVRGLVLE SGYYYPSPRA DLALFSIAAL PLIGDVLRYT AYPLTARLLW
PIMRRNLFSP AAVAPSFERF PSSMAMRPSQ LHASAAESAL MVPNAAVLQR HYRKLRMPIA
IIAGIGDRMV DVDGQSRRLH GEVLQSSLHL VEECGHMVHH TAPHRVLAGL EEVRRAACEA
SARRETSLQA T
|
|---|
| |