Gene Mext_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1315 
Symbol 
ID5834225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1458985 
End bp1460109 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content63% 
IMG OID641367108 
Productglucose sorbosone dehydrogenase 
Protein accessionYP_001638787 
Protein GI163850744 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.986351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGTA TTCTCGTTGC GACCGCGGCC GTGCTCACGA TGGCTCTGCA CCCTGCCGTG 
GCGCGGCCGC CCGAGCGCCT CAGCACCGAG AAGGCCGAGA TCGTCGTAGA GCCCGTTGCC
TGCAATCTTG ACCATCCCTG GGGTCTAGCC TTTCTGCCGG ACGGACGCAT GCTGGTCACC
GAGCGCGGTG GCCGCCTGCG CATCGTCTCA GCAGGGGGAC AAGTCTCGCC CCCGCTCCCC
GGAACTCCAC CCGTCCATAC CGGCGAAGGT GGGCTTCTAG ACGTAGCGGC AGATCCCAAC
TTCTCAGAGA ACCGCTTTAT CTATCTAACC TACGGCGAAC CGCGCGAGAG CGGAGCGGCT
ACAGCCGCTG GGCGCGGAAG GCTCAACTCA GACCAAACCG CGCTGGAGGA CTTCCAAGTC
ATTTTCCGGC AGCAGCCGGT GGGTAGCAGT GACGCTGGCC ACTTTGGCTC TCGCCTTCTC
TTCGCGCCCG ACGGCAAGCT CTTGATCTCA ACCGGCGACC GGTTCGCCCC GGACCTTGCC
CAGGACCTCT CGACCGACGT CGGCAAGCTC ATCCGCGTCG ACCCGGATGG CTCCACGCCA
CCTGACAATC CGTTCGCGAA CCATAAGGGC GCTCGGCCCG AGATCTGGTC CTACGGTCAC
CGCAACATCC AAGGCCTCGC GGTCCAGCCA GAAACCGGCG CTCTGTGGGC AGGCGAGTTC
GGGCCGACCG GTGGTGACGA GATCAACATC ATTGAGCCCG GGCGCAACTA TGGCTGGCCT
CTAGTCAGTT GGGGTCAGCA CATGGATGGA AGCGCAATTC CAAGGCCACC GGCACGGCCG
GACCTTGCCG ATGCCGCTTA CCATTGGTCG CCCTCGATCT CATTCTCAGG AATAGCGTTC
TACTCCGGCA GCTCTTTTCC GAGCTGGCGT GGGAACCTGT TTCTTGCTGG ATTGACTTCA
CAGGCTGTCA TTCGTCTGAC GCTCGTCGCG TCGCGCGTCA CCGGTGAGGA GCGCATTCCC
ATGGGTGAGC GCATCCGGCA GGTTGTTCAA GGACCAGACG GTCTCCTCTA CCTCCTGACC
GACGAAGATC AGAGATGCAT CCTGCGTTTC AAGCCGGGCC GCTGA
 
Protein sequence
MIRILVATAA VLTMALHPAV ARPPERLSTE KAEIVVEPVA CNLDHPWGLA FLPDGRMLVT 
ERGGRLRIVS AGGQVSPPLP GTPPVHTGEG GLLDVAADPN FSENRFIYLT YGEPRESGAA
TAAGRGRLNS DQTALEDFQV IFRQQPVGSS DAGHFGSRLL FAPDGKLLIS TGDRFAPDLA
QDLSTDVGKL IRVDPDGSTP PDNPFANHKG ARPEIWSYGH RNIQGLAVQP ETGALWAGEF
GPTGGDEINI IEPGRNYGWP LVSWGQHMDG SAIPRPPARP DLADAAYHWS PSISFSGIAF
YSGSSFPSWR GNLFLAGLTS QAVIRLTLVA SRVTGEERIP MGERIRQVVQ GPDGLLYLLT
DEDQRCILRF KPGR