Gene Mext_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1300 
Symbol 
ID5833932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1445255 
End bp1446268 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content68% 
IMG OID641367092 
Producturea transporter 
Protein accessionYP_001638772 
Protein GI163850729 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4413] Urea transporter 
TIGRFAM ID[TIGR03441] urea transporter, Yersinia type 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGAG CGAACAGCAA CCTTCTCGTC CAGTCGCTGC GCGGGACGAG CCAAGTCTTC 
TTCATGGAGA ATGCCCTGAC GGGCGTGCTG TTCTTCGCCG CGATGGCCTA CGCCTCGTCG
GTGACGGGCA ATTGGGCCAC CACAATCGGG GCGGCGATCG GCGTCCTCGT CGCAACGCTG
ACCGCACGAC TTCTGGAATG CGACGACCCC TCCGTCTCCT CCGGTCTCTA CGGATTCAAC
GGCGTTCTCG TCGGCGCCGC GCTTCCGACC TTCATCGCAG CCTCGCCCCA ACTCTGGGCC
TCGATCGTGA TCGGCGCGGC GGCGAGCACG GTCTTCACCG CCGCCTTCAG CGCGACGCTC
ACCGGCAAAT GGGGCATTCC CGGATCGACC GGCCCCTTCG TGCTGACGGG CTGGCTGATG
GTCGCCGCAG CCTATTCCTT CGGCGGCCTG CACGTGACGG GCGATGCCCC CAAGCTCGCG
GGTGACGTCG CGGGCCTGAC CGGCATTCCG GCACTGACGG ACCTCGTCGC GATCTTTTTC
CGCAACATCG CGCAGGTCTA CCTGCTGGGC AGCGCCGTCA GCGGCGTCAT CATCCTGGCC
GGCATCCTGA TCGCCTCGGT CCCGGCCGGG ATCGCTGCCG CTGCCGGATC GCTGATCAGC
ATGATCGTCG CGATCGCGAT GGGTGCCGAT CCCAAGGCCG TGAGCCAGGG CCTCTACGGC
TTCAGCCCGG TCCTGACGGC GATGGCCGTC GGCGTCGTCT TCCTGACGCC CTCGCCGCGG
GTGGCCGTCT ATGCCGGTCT TGCGACCGTG ATGACCGTCT TCGTCCAGGG CGCCCTCGAC
GTCATGGTCG CGCCGGCGGG CATCCCGTCC TTCACCGCCC CCTACGTGCT GACGATGTAC
CTGTTCATCG CGCCGAAGAA GCTGATGGCG CCCCATCCGC ACGGGCCCGT CGCCGATCCC
ATGATCGACG ATCAAGGCAA GGTGCCGGTC CACGCGGCCG GAACCGCACG GTGA
 
Protein sequence
MPRANSNLLV QSLRGTSQVF FMENALTGVL FFAAMAYASS VTGNWATTIG AAIGVLVATL 
TARLLECDDP SVSSGLYGFN GVLVGAALPT FIAASPQLWA SIVIGAAAST VFTAAFSATL
TGKWGIPGST GPFVLTGWLM VAAAYSFGGL HVTGDAPKLA GDVAGLTGIP ALTDLVAIFF
RNIAQVYLLG SAVSGVIILA GILIASVPAG IAAAAGSLIS MIVAIAMGAD PKAVSQGLYG
FSPVLTAMAV GVVFLTPSPR VAVYAGLATV MTVFVQGALD VMVAPAGIPS FTAPYVLTMY
LFIAPKKLMA PHPHGPVADP MIDDQGKVPV HAAGTAR