Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1284 |
Symbol | |
ID | 5832497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 1425332 |
End bp | 1426036 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641367076 |
Product | ABC transporter related |
Protein accession | YP_001638756 |
Protein GI | 163850713 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.275207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTGAGA TCGATCGCCT CGACGCATGG TACGGCCCGA GCCATGTCCT GCATGGCCTC TCCCTCGAGG TGCGGCCGGG CGAGATCCTG GCGCTGGTCG GCCGCAATGG CGCGGGCAAG ACCACGACCA TGAAGGCCGT GATGGGCCTG ATCCCGAAGG TCGCCGGCAG CGTCCGCTTC CTCGGGGAGG ATCTGCTCGG GCGCCCGGCC CATGCCCGCT TTCCACTGGG CCTGGCTTAC GTGCCCGAGG ACCGGCGCAT CGTGCCCGGC CTCACCGTGC GCGAGAACCT GAAGCTCGGA CTGCTGCGCG CCCCGGCTTC CATCAAGGAG GGACCGGCCA TCGCCGAGAT CGCCGAGACC TTCCCGCGCC TCGCCGAGCG GCTCGATCAG ACGGCCGTGA CGATGTCCGG CGGCGAGCAG CAGATGCTCG CCATCGCCCG CGCGATGATC GCGCGCCCCA AACTGATCCT GCTCGACGAG CCCTCCGAGG GCATCATGCC GGTGCTGGTC GAGGAGATGG GCCGGCTGTT CGTCGCCCTG CGCGAGCGCG GGGTGACGCT GCTCCTCGTC GAGCAGAACG TCGAATGGGC GCTCAACCTC GCCGACCGCG CCGTGATCAT CGACCAGGGC GCGGTCGTGC ACGAGAGCTC GGCCGCGGCC CTTCGCGCCG ATACCGCGAT TCAGGATCGC TACTGCGCGG TCTGA
|
Protein sequence | MLEIDRLDAW YGPSHVLHGL SLEVRPGEIL ALVGRNGAGK TTTMKAVMGL IPKVAGSVRF LGEDLLGRPA HARFPLGLAY VPEDRRIVPG LTVRENLKLG LLRAPASIKE GPAIAEIAET FPRLAERLDQ TAVTMSGGEQ QMLAIARAMI ARPKLILLDE PSEGIMPVLV EEMGRLFVAL RERGVTLLLV EQNVEWALNL ADRAVIIDQG AVVHESSAAA LRADTAIQDR YCAV
|
| |