| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1279 |
|---|
| Symbol | |
|---|
| ID | 5831831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 1419882 |
|---|
| End bp | 1420817 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641367071 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001638751 |
|---|
| Protein GI | 163850708 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0802699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCTC CCGCCACAGC CGCCCCGACA GCCATTGCCC TCGACGGCAC CGTGCTCGGC
CCCGGGGACG CCGCGCCCGA GGCCGCCTTC ATCCCCTCGC GCGGATTCTG GGGCCATGTC
GGCCACCGCC TGGTGCGCGA CCCCGTCGCG ATGGCCGCGG GCGCCCTGAT CCTCGCGATG
ATCGCGGTGG CGATCCTCGC GCCCTGGATC ACGCCGATGG ACCCCTACAA GGGCTCGATG
CTGCGCCGCC TGAAGCCCGT CGGCGACGCG GTGTACTGGC TGGGCTCGGA CGAGCTCGGC
CGCGACATGA TCAGCCGCCT GATGCTCGGC GCGCGGCTGT CGCTGTTCAT GGGCGTAACG
CCGGTGCTGA TCGCCTTCGT GATCGGGTCC GCCATCGGCA TTCTCGCCGG CTACGTCGGC
AGCTGGACCA ACACGATCCT GATGCGCACC ATCGATGTCT TTTTCGCTTT TCCCTCCGTC
CTCCTGGCGA TCGCGCTCTC GGGGGCGCTC GGGGCCGGCA TCTTCAATGC CATCGTCTCG
CTGACCTGCG TGTTCGTGCC CCAGATCGCG CGGGTGGCTG AGAGTGTCAC CACCGGCATT
CGGCGGCGCG ACTATATCGA CGCGGCCAAG CTCTCCGGCG CCTCGGCGCT GACGATCATG
CGGGTGCAGG TGCTCGGCAA CGTCGTCGGG CCGATCTTCG TCTACGCCAC CGGCCTGATC
TCGGTCTCGA TGATCCTGGC CTCGGGCCTC TCGTTCCTCG GCCTCGGGGT GCGCCCCCCC
GAACCGGAAT GGGGCCTGAT GCTGAACACG CTCCGCACCG CGATCTACGT CAATCCCCTC
GTCGCGGCCC TGCCGGGCGT GTGCATCTTC ATCGTCTCCA TCTCCTTCAA CCTGTTCTCG
GACGGCCTGC GCAACGCCAT GGAGATCCGC CAGTGA
|
|---|
| Protein sequence | MNAPATAAPT AIALDGTVLG PGDAAPEAAF IPSRGFWGHV GHRLVRDPVA MAAGALILAM
IAVAILAPWI TPMDPYKGSM LRRLKPVGDA VYWLGSDELG RDMISRLMLG ARLSLFMGVT
PVLIAFVIGS AIGILAGYVG SWTNTILMRT IDVFFAFPSV LLAIALSGAL GAGIFNAIVS
LTCVFVPQIA RVAESVTTGI RRRDYIDAAK LSGASALTIM RVQVLGNVVG PIFVYATGLI
SVSMILASGL SFLGLGVRPP EPEWGLMLNT LRTAIYVNPL VAALPGVCIF IVSISFNLFS
DGLRNAMEIR Q
|
|---|
| |