| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1274 |
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| Symbol | |
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| ID | 5832324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1414548 |
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| End bp | 1416032 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641367066 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_001638746 |
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| Protein GI | 163850703 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGGGG AATGTAAGAT GCGACGCGGC GGACACGGAA TGGAACGGGG ATCGGCTCGG
CCCGGACGAA TGGCATGGGC GGCCGGCACG CTCCTCGGCG CCCTGGCCTT CGGCCTGCCC
GTGAGCGTCT CCGCGCAGCA GCCCTCGCCG GTGGGCCAGT TCAACGATCA AACCCAGCCG
CGCACCGATC CGCGCATCGC CGAGAAACCC AGCGATCCCG TCCGCGTCGG CCCGCTGGCG
CCCTGGGCCA CCCACATGGC CGAGCGGGGG CTCACCTTCG ACATCAACAT CTACAACTTC
TACCAGGCCA ACCCCTCCGC CGGCCTGCGC ACCGGAGAGC AGTCGAACTC GACCTACTTC
GTCCTCTCCA TGACCGCGGA CATGCAGCGC ATCGCCAACA TCAGTGGCGG CACCATCAAG
TTCACGCAAA CCTTCTTCGG CAACGTCCGC AACCTCAACA TGGCCGCCGA TATCGGCGAC
ACCACGGTCG GCTACCAGCC GCCGTTCAAC CCCAACAACA ACCGCCTCTC GCTGCTCACC
TACCAGCAGA AGCTGCTCGA CGACCGCCTC GTCATCGAGG TCGGCCGCAC CCACCCCGAT
CGTTACTACG GCCTGCCGCC GTGCAACTCG ATCAATTCCT GCTTCCAGGA CCTGTTCTAC
ATCAACGCCG GCTTCACCTC GCCGCTCTAC GCGGTCTGGG GCGCGAACGC CGCCTACCAG
CTCTCGCCCA CCAGCTACGT CCAGGCCGGC GCCTTCTCGG TGAACCCCGG CACCAACGCA
CTGTCGGGCT ACGATTTCGG CTACGAGCGG CTCTCGGGCG CGCTGGTGAT GGCCGAGATC
GGTACCAAGA CCGACTACAC CATGACCGCC TATCCCGGCC GCGCCTCGCT CACCGGCTTC
TTCAACACGG CCGATCACGA CGACAACTTC AAGACGGTGT TCGGCACCTC GAAGGGCCTG
AACCCCGGCG CCCCGGTGCT GCAGAAGTCG GGCACGTCCG GCATCGTGCT CACCGGCACG
CAGACGGTCT GGCGCGCCGA TGGCGGCCTC GTCGCCAACC CGCACCCCAC CGCGATCTCG
CTCTATACCG GCACGGGCTA TTCGTTCGAC CCGACGGTGC CGATCCGCTT CAACTCGTTC
GTCGGCGTGC GCCTCGACGC GCCCGACCAG AGCCGGCCCA ACGACAGCTA CGGCCTGAAG
ATGAACTGGC AGCGCTTGTC GGAGAACTAC ACGCAGTTCC TGTCTGACGC GAACTTCATC
TCGGGCGGCT CGGGCGCCCC GTATTCGCGC GACAAGTTCG TGTTCGAGGC CAACGCGCAC
TTCGACGTCG GCGCGGGCGT GATCATCGAG CCGGTGGTCC AGTACGTGGT CAACCCGAAC
TCGTTCTGGA ACCCCTTCAC CGCGCGGCGT GCCAAGGACG GCTTCTACGC CGGCGCCACC
CTCGTCGTCC CGCTCGGCAC CCTGCTCGGC CTCGCTCCGG GCTAG
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| Protein sequence | MQGECKMRRG GHGMERGSAR PGRMAWAAGT LLGALAFGLP VSVSAQQPSP VGQFNDQTQP
RTDPRIAEKP SDPVRVGPLA PWATHMAERG LTFDINIYNF YQANPSAGLR TGEQSNSTYF
VLSMTADMQR IANISGGTIK FTQTFFGNVR NLNMAADIGD TTVGYQPPFN PNNNRLSLLT
YQQKLLDDRL VIEVGRTHPD RYYGLPPCNS INSCFQDLFY INAGFTSPLY AVWGANAAYQ
LSPTSYVQAG AFSVNPGTNA LSGYDFGYER LSGALVMAEI GTKTDYTMTA YPGRASLTGF
FNTADHDDNF KTVFGTSKGL NPGAPVLQKS GTSGIVLTGT QTVWRADGGL VANPHPTAIS
LYTGTGYSFD PTVPIRFNSF VGVRLDAPDQ SRPNDSYGLK MNWQRLSENY TQFLSDANFI
SGGSGAPYSR DKFVFEANAH FDVGAGVIIE PVVQYVVNPN SFWNPFTARR AKDGFYAGAT
LVVPLGTLLG LAPG
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