| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1245 |
|---|
| Symbol | |
|---|
| ID | 5833066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1377885 |
|---|
| End bp | 1381073 |
|---|
| Gene Length | 3189 bp |
|---|
| Protein Length | 1062 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641367038 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001638718 |
|---|
| Protein GI | 163850675 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.98535 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.350784 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAAGGGC TGGCGTCCAC ACCCGACGGC GGCGCAGTCC TGGCCCGTGG CGTCCGGGCG
AGCCTGTCCA TAAATCAGCC GCGTTGTGCG CCGCTTGATC GGCCCTGGTA CGCTCTTCGT
TGCGTGCCGG CCGGGGACCT CAACCGCTCG ATGAACACCA TCCTGATCAA GCTGTTCGCG
ACCGCGCTGA CCCTGTCCCA GGTCACGACG CGGCCCGACG CGGTGCGGAC CCAGTTCGAC
CCGGCCAAGG ATGGCGGGCA GGTCGTGGCG ATCCTGCGCG ACGGCTGCGC CCACATGCGC
AAGTCCTTCG ACATCGAGGA TATCAATCTC GACGAGTTGA TCTCCACCGC CATGGAGGAT
CCGAGCGCGG TGGCGGGCGA CAACGCGCCC AAGATCCTGC ACGGGCTCGA CATCGCCGAG
TTGAACACGA GCTACAAGCA ATTCTGCAAG GGCGAGAACC CGCCCAATTC GCCTTTCGAG
GCGGCGGCGG TGATCGCCTT CTACAACAAC GCCGTGAAGG ACCTGCCCTC GGCCGAGGCC
CTGCGCGACA TCAAGCTGCC TAGCGCCAGC GTCATCCTGG ATGCGGCGGG CAAGCCCTAT
TCCGAGACCT TCGAGACGCA TGGGCGCCGC CTCGTCGTGC CGATCGAAGG CGTGCCCGAC
CTCGTGCAAA AGGCCTTCGT CGCGGCCGAG GACAAGCGTT TCTACCAGCA CCACGGCATC
GACGAGCGCG GTGTGATCCG CGCCTTCGTC GGCAACCTCG CCTCGCCGGG GCGGCCGGCC
GGCGGCTCGA CCATTACGCA GCAGGTGGTG AAAAACCTCT CGGTCGGCGA CGACGTCACC
TACGAGCGCA AGATTCGCGA GATGATCGTG GCCTCGCGCC TGGAGCGGCT CCAGACCAAG
CCGCAGATCC TCGGGCTCTA CCTCAACGGG ATCTATCTCG GCCGCGGCGC CTACGGCATC
GAAATGGCGG CGCGCTCGTG GTTCGGGAAG TCGGTCGGCG CGCTGACGCT GCCGGAGGCC
GCCCTGCTCG CCGGCCTGCC GAAGGGCCCG AACTATTACA GCCCCGACAA ATACCCGGAG
CGGGCGCGGG AGCGGCGCGC CTACGTGCTG AGCCGGATGA AGGAAGAGGG TACGATCACA
GAAGCGCAAA TGAATGCGGC GCTGGCCTCC GATCTCGGCA TCAAGCCGCC GGATGCCGCG
CGCCAGGATT CCGGCTTCTA CCTCGTCGAT CACGTGGCCC GCGAGACGCG TAGCTTCGCC
GGGCTCGAAA CGCTCACCAA CGCGAGCTAC ACCGTGCGCG CCACGGTGAA TGCCGGCCTG
CAAAGCGCGC TCGAAGCGGC GCTGCAGGAG GGTCTGGCGG CCTACGAGCG CGGCACCGGC
CGCGCCCGCT ACGAGGGGCC GGAACTGAAC CTGTCCGAGG CGATCAAGCG CATCGAGGCC
GCTGCGCCCG CACCGGAGCC CGCCGCCGAG CCGGCGCCCG CGCCCGAGGC GAAGAAGGGA
GTGCGGAAGG CGGCCGCGGC GAAGGCGCCG GCCAAGCCCA CCGTCCAGCC GGCTTGGCAG
CGCGCGCTCG TTTCCGCCCG GCCGCCGCTC TACGACGTGC GCTGGCCGCT CGCTGTGGTG
CTCCAGACGG GCAAGAACGG CACCAAAGTC GGCCTGCCCG ACGGCCGGGT CGCGAGCCTG
GAGCCCGGCC CCGCGCGCGG AAAGCTTCAA GTGTACGATG CCGTCCGGGT GCGCCTGCGC
GAGGGCAAAG GCAGCCTCCG CGCCGAGCTG CGCGTGCGCC CCACCGTCCA GGGCGCGGCC
ATCGTCTTGG AGAATCGCAC GGGCAAGATC CTGGCGATGA GCGGGGGCTT CTCCTATCCG
CTGAGCCAGC TCAACCGGGT GACGCAGGCC GTACGCCAGC CGGGCTCGAC CCTGAAGCCG
TTGACCTACC TCGCCGCGTT GAATGCGGGG CTCCAGCCCA ACACCCTGGT GATGGATTCC
GCCGTGACCC TGCCGCCGAT CGGCGGGGTT GGTGATTCAT GGTCGCCGAA GAACTACGAC
GGCGGCGGCT CCGGCGCGAC GACGATCCGG CGCGGGCTCG AATTCTCGAA GAATCTCGTC
ACCGCGCGCC TGCTTCAGGG CGGCATCGCG GCCAAGGCGC CCGACAGTCT GCAAAGGGTC
TGCGACATCG CGCTGGAGGC CCAGCTCTAC GCCGAGTGCG AGCGCTACTA TCCCTTCGTG
CTCGGCGCCC AGCCGGTGCG GATGATCGAT CTGGCGAGCT TCTACGCGGC CATCGCCAAT
GAGGGCGCGC GCCCGAGCGC CTACGCCCTG GAAGCGGTCG AGCGCGACGG CAAGCCGCTC
TACCGCCATC CCGACAAGGC GCCGGTGCGG ATCGGCTCGG CCGACCGGGT CGCGTTCTAC
CAGCTCAAGA CCATGCTCCA GGGCGTGACC CAGCACGGCA CCGCCGCGGC GCTCTCGGGC
ATCTCTGCTT ACGTCGCTGG AAAGACCGGC ACCTCGGAGA ACGAGAACGA CGCGTGGTTT
GCCGGCTTTT CGAACGAGAT CACCGTGGTG GTCTGGGCCG GCTACGACAA CGCCGACGGC
GTGCGCCGCA CGCTCGGCCG CGGCCAGACC GGCGGCCACG TCTCGGTGCC GATCGCGCGG
GCCATCTTCC AGGCAGCCTG GGCCAACGGT GTGGCCCGCA CGCCGCTGGC GCCCCCCTCT
CCGGAGGCGA AGGCGCTGAT CGCCGACCTG CCGATCGAGC CGAGGAGCGG CCAGCGCGTC
GCGGGCGGCG GCTTCATCGA GCATTTCCGC CTCAAGGGGG GGCAGGTCGC CGACACGCAA
TACGCGCTGG TGCCCCGCGA CACGCTCTAC GCCATGCGTC CCGACGCGGA GGACGGCGAT
TACGCCAACG CCGAGGACGG GGCGGACGTG GCTGGCGACC TCTTCGGCAA CCTGCCGGGC
GGGCGCCGGA CCACCGAAGA CCCGTTCGCG CAGCGGCGCA GCGCCGAGAC CGATTCCGGC
CGGACAGCCG ACCCTTGGGG CCTGCGCCGC GACCGCCGGG AGGAGCCGCA GGCTTGGCCC
GGCCGCGACC GCTACGGGCA GGTCAACCCG GTGCCGTTCG GCTCGCCCTT CGACGACGAA
GGCGACACCC GCACGCGCCA GCGCCGCCGC GATCCCGACT ACCTGTTCGG CGACGACCCG
GGCTACTGA
|
|---|
| Protein sequence | MEGLASTPDG GAVLARGVRA SLSINQPRCA PLDRPWYALR CVPAGDLNRS MNTILIKLFA
TALTLSQVTT RPDAVRTQFD PAKDGGQVVA ILRDGCAHMR KSFDIEDINL DELISTAMED
PSAVAGDNAP KILHGLDIAE LNTSYKQFCK GENPPNSPFE AAAVIAFYNN AVKDLPSAEA
LRDIKLPSAS VILDAAGKPY SETFETHGRR LVVPIEGVPD LVQKAFVAAE DKRFYQHHGI
DERGVIRAFV GNLASPGRPA GGSTITQQVV KNLSVGDDVT YERKIREMIV ASRLERLQTK
PQILGLYLNG IYLGRGAYGI EMAARSWFGK SVGALTLPEA ALLAGLPKGP NYYSPDKYPE
RARERRAYVL SRMKEEGTIT EAQMNAALAS DLGIKPPDAA RQDSGFYLVD HVARETRSFA
GLETLTNASY TVRATVNAGL QSALEAALQE GLAAYERGTG RARYEGPELN LSEAIKRIEA
AAPAPEPAAE PAPAPEAKKG VRKAAAAKAP AKPTVQPAWQ RALVSARPPL YDVRWPLAVV
LQTGKNGTKV GLPDGRVASL EPGPARGKLQ VYDAVRVRLR EGKGSLRAEL RVRPTVQGAA
IVLENRTGKI LAMSGGFSYP LSQLNRVTQA VRQPGSTLKP LTYLAALNAG LQPNTLVMDS
AVTLPPIGGV GDSWSPKNYD GGGSGATTIR RGLEFSKNLV TARLLQGGIA AKAPDSLQRV
CDIALEAQLY AECERYYPFV LGAQPVRMID LASFYAAIAN EGARPSAYAL EAVERDGKPL
YRHPDKAPVR IGSADRVAFY QLKTMLQGVT QHGTAAALSG ISAYVAGKTG TSENENDAWF
AGFSNEITVV VWAGYDNADG VRRTLGRGQT GGHVSVPIAR AIFQAAWANG VARTPLAPPS
PEAKALIADL PIEPRSGQRV AGGGFIEHFR LKGGQVADTQ YALVPRDTLY AMRPDAEDGD
YANAEDGADV AGDLFGNLPG GRRTTEDPFA QRRSAETDSG RTADPWGLRR DRREEPQAWP
GRDRYGQVNP VPFGSPFDDE GDTRTRQRRR DPDYLFGDDP GY
|
|---|
| |