| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1228 |
|---|
| Symbol | |
|---|
| ID | 5833260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 1358051 |
|---|
| End bp | 1358923 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641367021 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001638701 |
|---|
| Protein GI | 163850658 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.824423 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCCTGGA CCGGAATCCC CGTGAGCACC ATCAGCGTCG TCACGCTCAA CAAGGGGCGC
GACGCCCATC TCGCCCGACT GATCGAGGGG CTCGCCCGCG GGCCTGCCCC CACCGAATGC
GTCGTGGTCC AGATGGGCCC GGCCCCCGAG CCGCTGCCGG CGACGCCGTT TCCGCTGCGG
CCGATCGCTT TCCCGAGCGC CGGCCTGCCG CTCGCCGCCG CGCGCAATGC CGGCCGGGCG
GCGGCCTCCG GCGACATCCT CGTCTTCCTC GACGTCGATT GCATCCCCTC CGCCGGCCTC
GTTCCGGCGC TGGCCGCAGC GGCGGCCGCG CATGACGGCC TCGTCTGCGG GCCGATCCGC
TACCTGCCCG CGGGCGCGGT GCAGGACGGC TGGCAGGAGG CCGACCTCCT GCAGGCCGGC
CTCCTGCACC CAGCCCGGAC GTTCCCGTCC AGCGGCGTGG CGGAGACGAA GAATCCCGGC
CTGTTCTGGT CGCTCGCCTT CGCGGTGCGC GCCTCGACCT ACGACCGGCT CGGCGGGTTC
GACGAGGGCT ATGACGGCTA CGGCGCCGAG GACACCGATC TCGCCTTCCG CGCGGCCGAA
ATCGGCGTGC CGGTGCTGTT GGCGGGCGCC CCGCCAGCCT TCCACCAGCA CCACCTCTCC
TGCGACCCGC CGCTCCAGCA TTTCGCCGAC ATCGTCCGCA ACGCCCGCCG CTTCCGCGCC
CGGCACGGGC TCTGGCCAAT GGACGGCTGG CTCGATGCCT TCGCCCGGCT CGGCCTGATC
GGCGAGAGCC GCGAGCCCGA CATCACCCTC CTGCGCGGCC CGAGCCCGGA GGAGATCGCC
GCCGCGCGCG TGCCGCCCGA GCGGCCGTTC TGA
|
|---|
| Protein sequence | MAWTGIPVST ISVVTLNKGR DAHLARLIEG LARGPAPTEC VVVQMGPAPE PLPATPFPLR
PIAFPSAGLP LAAARNAGRA AASGDILVFL DVDCIPSAGL VPALAAAAAA HDGLVCGPIR
YLPAGAVQDG WQEADLLQAG LLHPARTFPS SGVAETKNPG LFWSLAFAVR ASTYDRLGGF
DEGYDGYGAE DTDLAFRAAE IGVPVLLAGA PPAFHQHHLS CDPPLQHFAD IVRNARRFRA
RHGLWPMDGW LDAFARLGLI GESREPDITL LRGPSPEEIA AARVPPERPF
|
|---|
| |