| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1167 |
|---|
| Symbol | |
|---|
| ID | 5834881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1286131 |
|---|
| End bp | 1286931 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641366960 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001638640 |
|---|
| Protein GI | 163850597 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.259654 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.174224 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGCCG GACCACTCGA ACGCTCCGCC CCGGCGCCCC TTGCGGCCGC CGGATCGCGG
CTCACCGTCG AGGCCGTGTC GCACGCCTTC GGCATCCGCG GCGCCGCGCT TCCGGTGCTC
GACCGCGTCT CCCTCGACGT GGCGCCGGGC GGCTTCGTGG CGCTGCTCGG TCCCTCCGGG
TGCGGGAAGT CCACCCTGCT GCGTCTCGTG GCCGGGCTGG AGCCGCCCGG CGCTGGCCGC
ATCTCGATCG ACGGGGCTGG GGTCACGAGC CCCGATCCCT CGCGCCTGCT CGTGTTCCAG
GACCCGACGC TCTATCCCTG GCGCACGGTG CAGGGGAACG TGATGCTGGG GCTGGAGGCT
CGCGGTGTCG CCAGGCGCGA GCGCGCGGCC CGGGTCGAGG CGGCCCTGCG CCTCGTCGGG
CTCGACGGCT TCAGCGAGGT CTTTCCGCAC CAGCTCTCCG GCGGCATGGC CCAGCGCGCG
GCGCTGGCCC GCGCCCTGGT GAACGCGCCG CGCCTTCTCC TCCTCGACGA ACCGCTCGGC
AAGCTCGACG CGCTGACCCG ACTCAGCCTT CAGGCCGAGA TCCTGCGGCT GTGGCAGGAG
ACGCGCTTTA CCGCGCTCCT CGTCACCCAC GACGTGGAGG AGGCGCTGGT GCTGGCCGAG
CGTGTCATCG TGCTCTCCGA CCGCCCGGCC GCGATCCGCG CGGACATCCT CGTCGAGCGT
CCCTATCCGC GCCACCGCGA CGATCCTGAA TTGGTGCGTC TGCGCCGAAA AATCCTCGGC
ATCCTCGGTC AATCGATCTG A
|
|---|
| Protein sequence | MVAGPLERSA PAPLAAAGSR LTVEAVSHAF GIRGAALPVL DRVSLDVAPG GFVALLGPSG
CGKSTLLRLV AGLEPPGAGR ISIDGAGVTS PDPSRLLVFQ DPTLYPWRTV QGNVMLGLEA
RGVARRERAA RVEAALRLVG LDGFSEVFPH QLSGGMAQRA ALARALVNAP RLLLLDEPLG
KLDALTRLSL QAEILRLWQE TRFTALLVTH DVEEALVLAE RVIVLSDRPA AIRADILVER
PYPRHRDDPE LVRLRRKILG ILGQSI
|
|---|
| |