| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1162 |
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| Symbol | |
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| ID | 5834511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1274047 |
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| End bp | 1275429 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641366955 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_001638635 |
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| Protein GI | 163850592 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.793756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATGC CTCCTGCCCC GATCCCGATC ACGTCGTCCG CCGCCCCCTC GTCGCCGCTG
GGCCGAGGCG GAACGGGCGC CGAGGACAGC GCCGTCCCGT CGATCGCGTG GCAGCGCTAC
GCGATCGCCG GCTATGCGCT CATCGCCGCG GCCTTCGGCG TCGCAGGTGC ATGGGCGGCC
ACCGTCCGCC TGGACCGCGC CGTCATCAGC ACCGGCGTCA TCGTCGCGGA AACCAGCCGC
AAGGTCGTCC AACACTTCGA GGGCGGCATG GTGCAGGCGG TGTTGGTGAA GGACGGGCAG
ACGGTTCGCT CCGGCGACGT CCTGCTGCGG ATCGATCCGC TACAGTCCCA GGCGAGTGCG
GATCTGTTCC GAAACCAACT CGACGCCGCT CTCGTCCTGG AGGCGCGGCT GCGGGCGGAG
CAGGCGCAGT CCGACGACCT GCAGCTGCCC GCCGACATCG CCGCGCGGCG CAACGAGCCC
GCCCTCGCAC GCATGATCGG CGATCAGGCG GGTCAGTTGG CCGAACGGAG GACGACGCTG
AAGGGCCAAC TCGCCCTCAT CGAGGCCAAA GTCACCCAGC TGAGGACGGA GATCTCCGGC
CTTGCCGTCG AGAAGTCCTC GGTCGAGCAG CAGGTCGGCT TCATCCGACA GGAACTGGAG
GGCCTGCGCA GTCTGCACGA GCGGAATCTG ATCCCGCTGT CGCGCCTCCT CGTGATGGAG
CGGGAGCGCA CGCGACTGGA GGGTGTCATC GGGCGCTCCG TCGCGGAGAG AGCAAAAGCC
GAGAACGCCA TCAGCGAGGC TGGGCTGCAG GTCACCCAGT TGAAGCAGAA GCTTCAGGAG
GCGGTCACCG GCCAGCTTGT CGAGACGCGG CAGAGGATCG GCGAACTTCG GGAAAAGCTC
GTCGTCGCGC AGGACGTGTT CCGGCGGCAC GAGATCCGCG CCTCCCACGA CGGGGTCATC
CAGGGGCTCA AGGTTTTCGC GATCGGGCAG GTCGTCCGCT CGGGCGAGCC GCTGATGGAG
ATCGTCCCGA CGGCGGACAG GCTCGTGGTC AACGTGCAAT TCTCGCCCAA CGACCTCGAG
GCCGTCCATG CCGGCATGCG GGCGGAGATC AAGTTTCCGA CCTTTCAGGC CCGCCGGACG
CCCGCAGTCT TCGGAACGCT CACGGTGGTG TCGCGGGACC GTCTGGTCGA CGAGGGGTCG
AAGCAGGCTT ATTTCGCCGG CACTGTGGAG ATCGACGAAC ACCAGCTTCC CGCCGAGGTC
CGACATCGCC TTCTCGCGGG CTTGCCAGCC GAGGTGGTGG TCTCGGCCGG GGAGCGCACG
GCCCTGGAAT ATCTGTTCGC ACCCTTCTTC GACGCGATGG GACGCGCCTT CCATGAACGC
TAG
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| Protein sequence | MTMPPAPIPI TSSAAPSSPL GRGGTGAEDS AVPSIAWQRY AIAGYALIAA AFGVAGAWAA
TVRLDRAVIS TGVIVAETSR KVVQHFEGGM VQAVLVKDGQ TVRSGDVLLR IDPLQSQASA
DLFRNQLDAA LVLEARLRAE QAQSDDLQLP ADIAARRNEP ALARMIGDQA GQLAERRTTL
KGQLALIEAK VTQLRTEISG LAVEKSSVEQ QVGFIRQELE GLRSLHERNL IPLSRLLVME
RERTRLEGVI GRSVAERAKA ENAISEAGLQ VTQLKQKLQE AVTGQLVETR QRIGELREKL
VVAQDVFRRH EIRASHDGVI QGLKVFAIGQ VVRSGEPLME IVPTADRLVV NVQFSPNDLE
AVHAGMRAEI KFPTFQARRT PAVFGTLTVV SRDRLVDEGS KQAYFAGTVE IDEHQLPAEV
RHRLLAGLPA EVVVSAGERT ALEYLFAPFF DAMGRAFHER
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