| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1158 |
|---|
| Symbol | |
|---|
| ID | 5833940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1268872 |
|---|
| End bp | 1269825 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641366951 |
|---|
| Product | LysR substrate-binding |
|---|
| Protein accession | YP_001638631 |
|---|
| Protein GI | 163850588 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.326337 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAAC TTGGCGGAGA ACTTTGGGCC GGACTGTGCC TCACCTCAGA TCACCGCATG
TTCGATTGGA ACGACCTCAC CTTCTTCCTG GAGTTGGCCC GGCATGGCCG GCTGATGCCG
GCCGCGCGTC GGCTCAAGGT CGATAACACG ACGGTCAGCC GTCGCATTGC GGAGTTGGAG
CGGGGGCTCG ACACAAAACT GTTCCAGCGC TGCTCCGACG GCTTCCTGCT GACCGAGGCC
GGCCACAAGC TCTTCGTGAT CGCGGAGGCG ATCGAACAGA AGATGCTGTC CGTGCCGGAC
GAACTCGGCC TCTCCGATGG AGCCGAGCCC GCGGGACGCG TGCGTGTGGC CAGCATGGAA
GGCATCGCCG CCTTCTACCT GTCGGCCAAG TTCGCCGAGT TCGCCACCGC CATGCCCGGC
ATCGTGGTCG AGCTCGTCAC GGAGCGGCAC CTCATCAACC TGACCAAGCG CGAGGCCGAC
ATCTCGGTGT CCTTCGTGCC GCCCCAGGGC CCGCGCCTCA AGGTGCGGCG GGTCGGCGAG
TTCCGCTTGG CCCTGTTCGG GGCGGAACGC TACTTCGCCA CGCATGGCCG CCCGACGACG
CGCCCCGACC TTCAAGACCA CGATTTCGTG GACTACGTCG ATGATCTCGT AGCGATCGAG
CCGGTGCATT GGCTGCTCGA AGTCCTGAAA CCGACGAACG TGGTCTTCCG CTCCACCAGC
ATGGCTGCCC AGCAGACGGC CGTCGCCGCA GGGGCGGGGC TCGGCCTGCT GCCGCTTTTT
TCAGCAAAAA CCAACCCGGC GCTCATCCCC GTTCTGGCGG ACGATGTGGT GGTGCAGCGC
GAACTCTATC TCGGTGTTCA CGAGGACATC GAGCATGCCG GCCGGATCCG TGCCGTGACA
CGCTTCCTGG CCGACCTGTT CTCAAAGGAG GCAGCGTACT TGAACCGGTT TTAG
|
|---|
| Protein sequence | MEKLGGELWA GLCLTSDHRM FDWNDLTFFL ELARHGRLMP AARRLKVDNT TVSRRIAELE
RGLDTKLFQR CSDGFLLTEA GHKLFVIAEA IEQKMLSVPD ELGLSDGAEP AGRVRVASME
GIAAFYLSAK FAEFATAMPG IVVELVTERH LINLTKREAD ISVSFVPPQG PRLKVRRVGE
FRLALFGAER YFATHGRPTT RPDLQDHDFV DYVDDLVAIE PVHWLLEVLK PTNVVFRSTS
MAAQQTAVAA GAGLGLLPLF SAKTNPALIP VLADDVVVQR ELYLGVHEDI EHAGRIRAVT
RFLADLFSKE AAYLNRF
|
|---|
| |