| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1120 |
|---|
| Symbol | |
|---|
| ID | 5833655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1222150 |
|---|
| End bp | 1222803 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641366915 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001638595 |
|---|
| Protein GI | 163850552 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCAGCAA CCCGGATCTC CTCGCCCGAA CTGCTCGAGC TGCCAGCCGA GGCCTTCACG
AAACATGACC CCTCGCCCGA TTCCCGCTTC TACAGCGAGC CGCGCTTCGT CACGCATATC
GATGAGCCGG CCATCGCCGC GGTGACGCGC CTGTACGCCG AACTACTCCC CTCGGGCGGC
ATCATCCTCG ACATGATGTC GAGTTGGGTC AGCCACCTTC CCCCGGAGAA AGCCTTTTCG
GCGGTGATCG GCCATGGCTT GAACCAGCGC GAACTCGACG CCAACCCACG GCTGACACGA
CGCTTCGTGC AAGATCTGAA TGCCGACCCG CATCTCCCCA TCGAGAGCGC GAGCGTCGAC
GCGGCGCTGA TCTGCGTGTC GGTGCAGTAC CTCCAGCAAC CGGTGACGGT GCTGTCCGAG
GTTGCGCGCG TGCTCCGCCC AGGATCGCCG GTCATCGTCA GCTTCTCGAA CCGCTGTTTC
CCGACCAAGG CTGTCGCGAT CTGGACGGCT CTCGATGCGA TGGGGCACGC GCAGCTCGTC
GATGTGTATC TGCGACGCGC AGGTTTTGCG CGAACCGAAA CACGGGTCCT GATCCCGGAT
GGTGGCCCGA GCGATCCGAT GACGGCTGCG GTCGGCTGGT TCGCACCGGA ATGA
|
|---|
| Protein sequence | MSATRISSPE LLELPAEAFT KHDPSPDSRF YSEPRFVTHI DEPAIAAVTR LYAELLPSGG
IILDMMSSWV SHLPPEKAFS AVIGHGLNQR ELDANPRLTR RFVQDLNADP HLPIESASVD
AALICVSVQY LQQPVTVLSE VARVLRPGSP VIVSFSNRCF PTKAVAIWTA LDAMGHAQLV
DVYLRRAGFA RTETRVLIPD GGPSDPMTAA VGWFAPE
|
|---|
| |