Gene Mext_1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1109 
Symbol 
ID5831178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1209443 
End bp1209829 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content62% 
IMG OID641366904 
Productendoribonuclease L-PSP 
Protein accessionYP_001638584 
Protein GI163850541 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID[TIGR00004] endoribonuclease L-PSP, putative 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAAC GTGTGGTCAC CGAACCGGAC AACTATGCGC CGTTCCTGCT CTCGCAGGGC 
ATCCGCTACG GGAACCTGCT CTTCATCTCT GGCCAAGCGG GCGCCGCGGA TGACGGCAGG
ATCGTCGAGG GCGGCTTCCG GGCACAGGGT GGACAGGCCT TCGCCAACCT GCGCCGCGCC
CTTGAGGCCG GTGGATCGAG CCTGAAGGAT GTCGTCAAAG TGACGATCTT CGTCACCGAC
ATGAGCCACT TCAAGGATGT GGTCGAGTTG CGGCGACAGT TCTTCTCCGA ACCCTATCCA
GCCGACACGA TTGCGGAGGT TAAGGCGCTC TACGATCCTG CGGCGATGAT CGAGATCGAG
GCTATCGCGG CCGTCCACAC CCCCTGA
 
Protein sequence
MLERVVTEPD NYAPFLLSQG IRYGNLLFIS GQAGAADDGR IVEGGFRAQG GQAFANLRRA 
LEAGGSSLKD VVKVTIFVTD MSHFKDVVEL RRQFFSEPYP ADTIAEVKAL YDPAAMIEIE
AIAAVHTP