Gene Mext_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1100 
Symbol 
ID5831420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1197950 
End bp1198609 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content68% 
IMG OID641366895 
Producthypothetical protein 
Protein accessionYP_001638575 
Protein GI163850532 
COG category[S] Function unknown 
COG ID[COG4765] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.102051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCCGCA TCCCCGCAAC GATCCTGCGC CGGACCGCAC TCGGCACGCT CGCCCTGGCG 
CTCTGCGCGC TGCCGGCCTC TGCCGACAAG ATCAAGAACC CGACCGCGGT GTTCTCCGGC
CTCGACAAGA TCACCGGCCG GATCGTGACC TTCGAGGTCG CCATCGACGA GACGGTGCAG
TTCGGCGCGC TGCAGATGAC GCCGCGGGTC TGCTACTCGC GCCCGCCCAC CGAGACGCCG
AAGACCACGG CCTTCCTCGA GGTCGACGAG GTGACGCTGG ACAGCAAGTA CCGGCGCATC
TTCACCGGCT GGATGTTCGC GGCGAGCCCC GGCCTGCACG CCATCGAGCA CCCGATCTAC
GATGTGTGGC TGACCGATTG TAAGGGCGGC TCCGACGTAA TCGCCGAGGC GAAGGAGCAG
GAGGACGTGC CCGCGCTCGC CTCGCGCCAG GACAAGCCGA GGAAGAAGGG CGCGGACCCG
ACCAAGACGT CCGCCCAGGT CAACCAGAAC GGTCAGGTCG ACGTCGAGGG GCCGCGCGGC
GTGCCGGTCC AGCCCAAGCA GAAGCCCTCG CGCAAGTTCT TCCCGAACAA CGAGGGGCCG
GCAGCGGCCC CGCCGCCTCC GCGCGAGCCG CAATCGATCT TCGACGCGAT TTTTCGTTAA
 
Protein sequence
MSRIPATILR RTALGTLALA LCALPASADK IKNPTAVFSG LDKITGRIVT FEVAIDETVQ 
FGALQMTPRV CYSRPPTETP KTTAFLEVDE VTLDSKYRRI FTGWMFAASP GLHAIEHPIY
DVWLTDCKGG SDVIAEAKEQ EDVPALASRQ DKPRKKGADP TKTSAQVNQN GQVDVEGPRG
VPVQPKQKPS RKFFPNNEGP AAAPPPPREP QSIFDAIFR