| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1084 |
|---|
| Symbol | |
|---|
| ID | 5832400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1182273 |
|---|
| End bp | 1182860 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641366878 |
|---|
| Product | NADH dehydrogenase subunit B |
|---|
| Protein accession | YP_001638559 |
|---|
| Protein GI | 163850516 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.0355895 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGA CTCCGACCTT CTCCCGCGCG CCCGACATCG CGCCGGCGCC CAAAGGGATC
ATCGATCCCG CGACCGGGCG TCCGATCGGC GCGAACGATC CGACCTTCCT GTCGATCAAC
GACGAGTTGG CGGATCGCGG CTTCCTCGTC ACCAGCGCCG ACGAGCTCAT CAATTGGGCC
CGTACCGGCT CGCTGATGTG GATGACCTTC GGTCTCGCCT GCTGCGCGGT CGAGATGATG
CAGATGTCGA TGCCGCGCTA CGACTGTGAG CGCTTCGGCT TCGCGCCGCG CGGTTCGCCG
CGGCAATCCG ACGTGATGAT CGTTGCCGGC ACGCTGACCA ACAAGATGGC CCCGGCCCTG
CGCAAGGTCT ACGACCAGAT GCCGGAGCCG CGCTACGTCA TCTCCATGGG CTCCTGCGCC
AACGGCGGCG GCTACTACCA CTACTCCTAC TCGGTGGTGC GCGGCTGCGA CCGGGTGGTG
CCGGTGGATA TCTACGTGCC GGGCTGCCCG CCGAGCGCCG AGGCCCTGCT CTATGGCGTC
CTGCTGCTGC AGCGGAAGAT CCGCCGCATC GGAACGATCG AGCGGTGA
|
|---|
| Protein sequence | MALTPTFSRA PDIAPAPKGI IDPATGRPIG ANDPTFLSIN DELADRGFLV TSADELINWA
RTGSLMWMTF GLACCAVEMM QMSMPRYDCE RFGFAPRGSP RQSDVMIVAG TLTNKMAPAL
RKVYDQMPEP RYVISMGSCA NGGGYYHYSY SVVRGCDRVV PVDIYVPGCP PSAEALLYGV
LLLQRKIRRI GTIER
|
|---|
| |