| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1083 |
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| Symbol | |
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| ID | 5832280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 1181602 |
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| End bp | 1182261 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641366877 |
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| Product | NADH (or F420H2) dehydrogenase, subunit C |
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| Protein accession | YP_001638558 |
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| Protein GI | 163850515 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0768548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGGCCA TCACCACCAA CGGCATCACG CTTCGCCGCA CCGTCGCGGC CGTCCAGGGC
GAGGACGCCC TGCGGGCCAT GGGCGAGCGG ATCGCCGGAG CGCTCGGCCC GGCGGTCACC
GAATGGGCCA TCACCCGCGG CGAGCTGACG CTCGTCGTCC AGGGCAGCGA CATCGTCTAC
GCGCTGACCT ACCTGCGCGA TGAGCCGGCC TGCGCCTTCC GCTGCTTCAT TGACATCTGC
GGCGTCGACT ACCCACAGCG GGCACGCCGC TTCGACGTCG TCTACCACCT GCTCTCCCTG
CGCCATAACA TGCGGGTACG GGTAAAGGTG CAGACCGACG CCGCGACTCC GGTGCCCTCG
GCGATTCCGG TCTTCCCGGC GGCCAACTGG TACGAGCGCG AGACCTACGA CCTCTACGGC
ATCCTGTTCT CGGGCCATCC CGACCTGCGC CGGCTGCTCA CCGATTACGG CTTCGAGGGC
CATCCACTGC GCAAGGATTT CCCGCTGACC GGCTTCGTCG AGGTCCGCTA CGACCAGGAC
GAGGCGCGCG TCGTCTACGA GCCGGTCAAG CTGACCCAGG AGTTCCGCAA CTTCGACTTC
CTGTCGCCGT GGGAGGGCAC GGACTACGTG CTCCCCGGCG ACGAGAAGAC GTCGAGCTGA
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| Protein sequence | MEAITTNGIT LRRTVAAVQG EDALRAMGER IAGALGPAVT EWAITRGELT LVVQGSDIVY
ALTYLRDEPA CAFRCFIDIC GVDYPQRARR FDVVYHLLSL RHNMRVRVKV QTDAATPVPS
AIPVFPAANW YERETYDLYG ILFSGHPDLR RLLTDYGFEG HPLRKDFPLT GFVEVRYDQD
EARVVYEPVK LTQEFRNFDF LSPWEGTDYV LPGDEKTSS
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