Gene Mext_1076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1076 
Symbol 
ID5831077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1173292 
End bp1173912 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content66% 
IMG OID641366870 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 6 
Protein accessionYP_001638551 
Protein GI163850508 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.289892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAG CCGCCGCCTT CTTCTATCTC TTCGCGGGCT TCGCCGTGGC CTCGGGCTTC 
ATGGTGATCG CAGCCAGGAA CCCCGTCACC TCGGTGTTGT TCCTGATCCT CGCCTTCGTG
AACGCCGCCG GGCTGTTCGT GCTCATGGGC GCCGAGTTCC TGGCGATGAT CCTCGTCGTC
GTCTATGTCG GCGCCGTCGC GGTGCTGTTC CTCTTCGTCG TGATGATGCT CGACGTGGAC
TTTGCAGCCC TCCGCCAGGG CTTCCAGCGC TACCTGCCGA TCGGCGGGTT GATCGGCGCG
ATCTTCCTGA TCGAGCTGGT CCTCGTCGTC GGCACCTGGA CCATCGATCC GGGCCTCGTG
CAGGCGCCGC TCGGCCGCGC CGCCCATGGC GAGACTGCGA CCAACACCGA GGCGCTCGGG
CGGGTGCTCT ATACGGACTA CGTCTACGCC TTCCAGATCG CCGGCCTGAT CCTGCTGGTG
GCGATGATCG GCGCCATCGT GCTCACCCTT CGCGAGCGCA CCGGCGTGAA GCGCCAGAAC
ATCGCCGTAC AGAACGCCCG CACGCAGGGC ATGGCGGTCG ATACCATCAA GGTGCCCTCG
CGGCAGGGCG TGGAGGTCTG A
 
Protein sequence
MTAAAAFFYL FAGFAVASGF MVIAARNPVT SVLFLILAFV NAAGLFVLMG AEFLAMILVV 
VYVGAVAVLF LFVVMMLDVD FAALRQGFQR YLPIGGLIGA IFLIELVLVV GTWTIDPGLV
QAPLGRAAHG ETATNTEALG RVLYTDYVYA FQIAGLILLV AMIGAIVLTL RERTGVKRQN
IAVQNARTQG MAVDTIKVPS RQGVEV