| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1074 |
|---|
| Symbol | |
|---|
| ID | 5832480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1170811 |
|---|
| End bp | 1172922 |
|---|
| Gene Length | 2112 bp |
|---|
| Protein Length | 703 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641366868 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| Protein accession | YP_001638549 |
|---|
| Protein GI | 163850506 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.345965 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCACG CGATCGTCTT CTTCCCGCTC ATCGGCGCTC TGATCGCCGG CCTGTTCGGC
CGGTTCATCG GCGCGCGGAT GAGCGAGCTC GTGACGACGG GCTGCCTCGC CTTCGCAGCT
TTGCTGTCCT GGGGCGCCTT CTTCCTCGTC ACCGGCGACG GCCGCGCCGA GACCGTGCCC
GTCGCGCAGT GGTTCACCGC CGGCGACCTC GTGGTCGATT GGGCCTTCAA GGTCGACACG
CTGACCGCGG TGATGCTGGT GGTCGTGACC TCGGTCTCGA CCCTCGTGCA CCTCTACTCC
ATCGGCTACA TGCACGAGGA TCCGCACCGG CCGCGCTTCT TCGCCTACCT GTCGCTGTTC
ACCTTCGCCA TGCTGATGCT GGTGACGGCC GACAACCTCG TGCAGATGTT CTTCGGCTGG
GAGGGCGTCG GCCTCGCCTC CTACCTGCTG ATCGGCTTCT GGTACGAGAA GCCCTCCGCC
AACGCCGCGG CGATGAAGGC CTTCATCGTC AACCGCGTCG GCGATTTCGG CTTCTCGCTC
GGCATCTTCC TCGTCTTCGT CCTGACGGGT TCGGTCGGTT TCGACGCGAT CTTCGCCAAG
GCCCCGGAGC TGAAGGACGC GACCTTCCAC TTCCTCGGCC ATGACTGGCA CGCCCTGACG
CTCGCCTGCC TGCTCCTGTT CATGGGTGCG ATGGGCAAGT CGGCGCAGTT CCTGCTGCAC
ACCTGGCTCC CCGACGCGAT GGAGGGCCCG ACCCCGGTTT CGGCGCTGAT CCACGCCGCC
ACCATGGTGA CGGCCGGCGT GTTCATGGTC GCGCGCCTGT CGCCACTGTT CGAGCTGGCC
CCGACCGCGC TCACCGTCGT CACTGTCATC GGCGGCATCA CCGCCTTCTT CGCGGCCACC
GTCGGCCTCG TGCAGAACGA CATCAAGCGG GTCATCGCCT ACTCGACCTG CTCGCAGCTC
GGCTACATGT TCGTCGGCCT CGGCGTCGGT GCCTACGCCA CGGGCGTGTT CCACCTCTTC
ACCCACGCCT TCTTCAAGGC GCTGCTGTTC CTCGGGGCCG GCTCGGTCAT CCACGCGATG
CACCACGAGC AGGACATGCG GAACATGGGC GGCCTGCGCC GCTACATCCC CTTCACCACG
GCGATGATGA CGATCGGCAC GATCGCGCTG ATCGGCTTCC CCTTCACCTC CGGTTACTAC
TCGAAGGACG CGATCATCGA GGCGGCCTAC ATGTCGGACC GCCCGGGCCA TGTGCTGGCG
TTCCTCGCCA CCGTGATCGC CGCGCTGATG ACCTCGTTCT ACTCCTGGCG CCTGTTCTTC
CTCACCTTCG AGGGACCGCA GCGCTGGGTC GCGCATGGCG CCCACGGGCA TGACGATCAC
GCGCATGCGG CGCACGACCA CGCCCACGCG GCCTCTGCCC ATGAAGCCGA CGGCGCGCCG
GGGCACCACG AGGGCGTCGC CCACGACGAT CACGGTCACG ACGTCGAGCC GGCTTCGCAC
AGCGCGGTCG AGCACCACGA CCACGCGCCC CTCACGCCGC ACGAGAGCCC GCTCGTGATG
ACGATCCCGC TGGCGATCCT GGCCTTCGGC GCCCTGTTCG CCGGCCTGAT CTTCAAGGAT
CGCTTCATCG GGCACGACAT GGACAAGTTC TGGGGCAACG CGCTCCCGCA CGGGTCCGGC
AACGACATCA TGCACAAGAT CCACGACGCG CCGGGCTGGG TCGCCGCCTC GCCCTTCGTG
ATGCTGGTGC TCGGCTTCCT GCTGGCCTTC TGGATGTATC TGCGCCGGCC CGATCTGCCG
CATCGCCTCG CGGAGTCGCA GCCGATCCTG TACCGCTTCC TGCTCAACAA GTGGTACTTC
GACGAGATCT ACGACCGGAT CTTCGTCCGG CCGGCCAAGA ACTTCGGCCT GTTCCTCTGG
AAGGAGGGTG ACGGGCGCGT CATCGACGGC CTCGGCCCCG ACGGCATCTC GGCCCGGGTG
GTGGACATCA CCCGCGGCGT GGTCCGCCTC CAGACCGGCT ACGTCTACCA CTACGCCTTC
GTGATGCTCG TCGGGGTCGC CGGCCTGATC ACGTGGTACC TCGTCTCCGG CGTGCCTGGG
GGGACCCACT GA
|
|---|
| Protein sequence | MYHAIVFFPL IGALIAGLFG RFIGARMSEL VTTGCLAFAA LLSWGAFFLV TGDGRAETVP
VAQWFTAGDL VVDWAFKVDT LTAVMLVVVT SVSTLVHLYS IGYMHEDPHR PRFFAYLSLF
TFAMLMLVTA DNLVQMFFGW EGVGLASYLL IGFWYEKPSA NAAAMKAFIV NRVGDFGFSL
GIFLVFVLTG SVGFDAIFAK APELKDATFH FLGHDWHALT LACLLLFMGA MGKSAQFLLH
TWLPDAMEGP TPVSALIHAA TMVTAGVFMV ARLSPLFELA PTALTVVTVI GGITAFFAAT
VGLVQNDIKR VIAYSTCSQL GYMFVGLGVG AYATGVFHLF THAFFKALLF LGAGSVIHAM
HHEQDMRNMG GLRRYIPFTT AMMTIGTIAL IGFPFTSGYY SKDAIIEAAY MSDRPGHVLA
FLATVIAALM TSFYSWRLFF LTFEGPQRWV AHGAHGHDDH AHAAHDHAHA ASAHEADGAP
GHHEGVAHDD HGHDVEPASH SAVEHHDHAP LTPHESPLVM TIPLAILAFG ALFAGLIFKD
RFIGHDMDKF WGNALPHGSG NDIMHKIHDA PGWVAASPFV MLVLGFLLAF WMYLRRPDLP
HRLAESQPIL YRFLLNKWYF DEIYDRIFVR PAKNFGLFLW KEGDGRVIDG LGPDGISARV
VDITRGVVRL QTGYVYHYAF VMLVGVAGLI TWYLVSGVPG GTH
|
|---|
| |