| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1047 |
|---|
| Symbol | |
|---|
| ID | 5831514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 1141143 |
|---|
| End bp | 1142030 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641366842 |
|---|
| Product | ABC-3 protein |
|---|
| Protein accession | YP_001638523 |
|---|
| Protein GI | 163850480 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0160155 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGTTTG CCGATTGTCT TGATTTCCTG ATCGGCCCCT TCGTCGAGTT CGGCTTCATG
CGCCGGGCCC TCGCCGGGTG CCTCGCGCTG TCGCTGTCGG CACCGCCGCT CGGCGTCTTC
CTGATGCTGC GTCGGATGAG CCTGATGAGC GAGGCGATGA GCCACGCCAT CCTCCCCGGC
GCCGCCGCGG GCTTCCTCGT TGCCGGGCTG TCGCTGCCGG CGATGACGCT GGGCGGACTG
GTGGCCGGAC TTGCGGTGGC GCTGGCCGCC GGGCTCGTCA CCCGCTCGAC CGTGCTGAAG
GAGGATGCGA GTCTGGCTGC CTTCTACCTG ATCTCGCTCG CAGGCGGGGT GTTCCTCGTG
TCGCTGCGCG GCTCGCAGGT CGATCTGCTG CACATCCTGT TCGGCACCGT GCTGGCGCTC
GATGACGACG CGCTCACGCT GCTTGGCGGC ATTGCGAGCC TGACGCTGGT CGCGCTCGCC
CTGCTCTACC GCCCGCTGGT GATCGAGTGC GTCGATCCGC TTTTCCTGCG CACGGTCAGC
CGCGCCGGCG GCCCGGTGCA CTCGGCCTTC CTCGCGCTCG TCGTGATCAA CCTCGTCGGC
GGCTTCCAGG CGCTCGGCAC GCTGCTGGCG GTCGGCCTGA TGCTGCTGCC GGCGATCACC
GCCCGGTTCT GGGCCGCCGA CCTGTCGGGC CTGATCCCCG TGGCGATGCT GGTCTCGATG
ATCTCCAGCG TGACCGGCCT GCTGGTCTCC TACCACGCCG GCATCCGGCT CCCGACGGGA
CCGGCGATCG TGCTGGCGGC GGGTGCGCTC TACCTCGTCT CGATGCTGGT CGGCCCTCGC
GGCGGCCTGC TCCACCGCCT CGTGCGGCGG CGTCACCTGG AGGCGTGA
|
|---|
| Protein sequence | MTFADCLDFL IGPFVEFGFM RRALAGCLAL SLSAPPLGVF LMLRRMSLMS EAMSHAILPG
AAAGFLVAGL SLPAMTLGGL VAGLAVALAA GLVTRSTVLK EDASLAAFYL ISLAGGVFLV
SLRGSQVDLL HILFGTVLAL DDDALTLLGG IASLTLVALA LLYRPLVIEC VDPLFLRTVS
RAGGPVHSAF LALVVINLVG GFQALGTLLA VGLMLLPAIT ARFWAADLSG LIPVAMLVSM
ISSVTGLLVS YHAGIRLPTG PAIVLAAGAL YLVSMLVGPR GGLLHRLVRR RHLEA
|
|---|
| |