| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1045 |
|---|
| Symbol | |
|---|
| ID | 5831512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1139306 |
|---|
| End bp | 1139899 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641366840 |
|---|
| Product | Fe2+/Zn2+ uptake regulation protein-like protein |
|---|
| Protein accession | YP_001638521 |
|---|
| Protein GI | 163850478 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.806261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.0331742 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGGTC ACGCGCAGCA GCAGCACGGC CAAGGCAAGA GCCAAGGCGA CGGCAACCAT
GGCGACGGGC ACGTGCACGA CCATCACGGT CATGGCGCGT CCGCCTGCGG CGGGCATGCC
GTCTCGGTCG AGGACGTGAT CGAGCGGGCG GAGCGGCTCT GCCAGGCGCG CGCCTTGCAG
TTCACCCGGC TGCGGCGGGA CGTGCTCGCG GCGGTGGCGG CGGAGCACAA GCCGCTCGGC
GCCTACAACA TCGCCGAGCG GATGAGCGCC CCCGGGCGCC GGGTCGCGGC GGTGTCGGTC
TACCGCGCGC TCGATTTCCT TACCGAGCAG GGCTTCGTCC ACCGCATCTC CAGCCGCAAC
GCCTTCGTCT CGTGCGGGCA CGAGCACGGC GCGGGGGTGG GCCTCGTCTT CCTGATCTGC
CGCACCTGCG GCGGCATCGA CGAGATGACC GCCCCGGCGG TCGAGAGCGC CCTCGACCAG
ACGCTGGCCG GGGCCGGCTT CACCCCGACG AGCCGGATTC TGGAGGTCGA GGGGGAGTGC
GGCGCCTGCC GCGGGCGCGG GGACGCGCTG CCGGACGAGG CGAGCCGCGC GTAG
|
|---|
| Protein sequence | MRGHAQQQHG QGKSQGDGNH GDGHVHDHHG HGASACGGHA VSVEDVIERA ERLCQARALQ
FTRLRRDVLA AVAAEHKPLG AYNIAERMSA PGRRVAAVSV YRALDFLTEQ GFVHRISSRN
AFVSCGHEHG AGVGLVFLIC RTCGGIDEMT APAVESALDQ TLAGAGFTPT SRILEVEGEC
GACRGRGDAL PDEASRA
|
|---|
| |