| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1044 |
|---|
| Symbol | |
|---|
| ID | 5833665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 1137797 |
|---|
| End bp | 1139302 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641366839 |
|---|
| Product | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| Protein accession | YP_001638520 |
|---|
| Protein GI | 163850477 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.996068 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.0474242 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCACG AGCGCCCCCC TCAGCAGTAC CAGCGGCTGC CCGGCGACGG GGTAAGCCGC
TCTGTCTGGG CCTCGCTTCT GCCCAGGCGG CGGCGCATGG CCCTGCGCGT GGGCATCTCG
GCCTCCCTGC TGGCGGCTGA TCTCGTGGCG ATCTTCGCGG TCGGCTTCGC GGCGGATGTG
GCCTACCACG CCTATATCGG CGACGGGGAG TTGATCCCGC TCACGAACAG CATGAACCTT
CAGACGGCCG GCTTCCTGTC TCTGATCTTC GTGCTTACCA ACCTCGCCCG CGGCGAATAC
AGCATCGAGC GCTGCCTGTC GCAGACGCCG CATCTGCAGC GCCGGGCGAC GCTCTGGCTC
ATGGCCTGGG CGGTCGCCCT GCTGGTCGGC TTCGCGACGA AGACGACTCA GGACTTCTCC
CGCGTCGCCT CGGTCGCCTT CTTCCTGGCC GGCCTGCCCG TCACGATCCT CGTCCGCGCG
GGGACGGTGG CCATGGTACG CCGCAGCAGC ACCTCCGGCT CGCCCTCCGC CAGCCGGGTC
CACCTCGTCG GCTACGAGGA GGACGTGACG AACTTCTACG CCAACAACGA TGTCGAGGCG
CTGGGATTGC GCATCGTTGG GACGAGCTAC CTGCGCCGCC CCGAGCCCGC CTCCGGCACG
GGGAACGCGG AGAGTTTGCT CGCCGAGGAT CTCGACCTCG CGGTCTCGGT GGTGCGGTTC
CTGCGGCCCG ACGACGTGTT CGTGCTGGTG CCGTGGTCGG AGCCCGCCGA CATCGAGCGC
TGCATCGACG CCTTCCTGCG GGTGCCGGCC GCCCTGCACC TGCGGCCCGG CACGATGATG
GATCGCTTCC CCGACCTGCA GGTCGCCCGG GTCGGCCGGC TCTCGGGCAT CAATATCGGC
CGCCGCCCGC TCTCGGTCGG CGAGATCCTG CTCAAGCGCG CCTTCGACGT GACGCTGGCC
GGGATCGGGC TACTGCTGCT CGCGCCGCTC TTCGTCGCAC TCGCGGTGCT GATCAAGCTC
GACAGCCCCG GCCCGGTCTT CTTCCGGCAG CGGCGCTACG GCTTCAACCA GGAGGCCTTC
GGCGTCTTCA AGTTCCGTAG CATGAAGGCC GCCCCCGACG CCCCCTTCCG GCAGGCCTCG
CGCAACGACG AGCGCATCAC CCGGATCGGC GCCCTGCTGC GCCGGACCAA CCTCGACGAG
TTGCCGCAGC TCCTGAACGT GATCCGGGGC GACATGTCGC TCGTCGGCCC CCGCCCGCAC
GCGCTGGCGC ATGACCGCAG CTTCGAGCGC CGCATCGCCC TCTACGCCCG CCGCCACAAC
GTGAAGCCGG GCATCACCGG CTGGGCGCAG GTGAACGGCT TTCGGGGCGA GACCCTGACC
GACGCGGCGA TGGAGAGCCG CGTCCAGGCC GATCTGCACT ACATCGACAA CTGGTCGCTC
TGGCTCGACA TCACGATCCT GTTCCGGACG ATCGCCTCGC CGCGCGCCTA CCGTAACGCG
TGCTGA
|
|---|
| Protein sequence | MFHERPPQQY QRLPGDGVSR SVWASLLPRR RRMALRVGIS ASLLAADLVA IFAVGFAADV
AYHAYIGDGE LIPLTNSMNL QTAGFLSLIF VLTNLARGEY SIERCLSQTP HLQRRATLWL
MAWAVALLVG FATKTTQDFS RVASVAFFLA GLPVTILVRA GTVAMVRRSS TSGSPSASRV
HLVGYEEDVT NFYANNDVEA LGLRIVGTSY LRRPEPASGT GNAESLLAED LDLAVSVVRF
LRPDDVFVLV PWSEPADIER CIDAFLRVPA ALHLRPGTMM DRFPDLQVAR VGRLSGINIG
RRPLSVGEIL LKRAFDVTLA GIGLLLLAPL FVALAVLIKL DSPGPVFFRQ RRYGFNQEAF
GVFKFRSMKA APDAPFRQAS RNDERITRIG ALLRRTNLDE LPQLLNVIRG DMSLVGPRPH
ALAHDRSFER RIALYARRHN VKPGITGWAQ VNGFRGETLT DAAMESRVQA DLHYIDNWSL
WLDITILFRT IASPRAYRNA C
|
|---|
| |