Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1041 |
Symbol | |
ID | 5833393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 1134751 |
End bp | 1135179 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641366836 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001638517 |
Protein GI | 163850474 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0368815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCCGA AACAGACAAC CGATGTCGAC CGCCTCGTCG GGCTCCGGAT CACCGCGCTG CGCAAGGCAC GCGGCTTGAG CCAGACCGCG CTCGGGACCG CGGTGGGTGT GACCTTCCAG CAGGTTCAGA AGTACGAGAA GGGCCAGAAT CGCGTTGGCG CCGGGCGCCT GCGCGAGATC GCCCGGCTGC TCGAGGTCCC GGTCTCCGCC TTCTTCGAGG AAGGCGATGG CGCCGCCGCC CAGGAGCAGA CCGAGGTGTT CGGCTTCCTG CGCGCGCACG GGGCCGTCGA TCTGCTGCGG GCCTTCGCGA CGATCGAGGA CGATCAGATG CGCCGCGAGG TTCTGGCGAT CGTGCGCAGC GCCGCCCGCC TCGGCCGCAA GAAAGACCCG GAAGTCGTCG TCGACGCCGT CGAGACGCGT CCGACCTGA
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Protein sequence | MMPKQTTDVD RLVGLRITAL RKARGLSQTA LGTAVGVTFQ QVQKYEKGQN RVGAGRLREI ARLLEVPVSA FFEEGDGAAA QEQTEVFGFL RAHGAVDLLR AFATIEDDQM RREVLAIVRS AARLGRKKDP EVVVDAVETR PT
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