Gene Mext_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1040 
Symbol 
ID5833392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1133159 
End bp1134484 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content73% 
IMG OID641366835 
Productcobyrinic acid a,c-diamide synthase 
Protein accessionYP_001638516 
Protein GI163850473 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1797] Cobyrinic acid a,c-diamide synthase 
TIGRFAM ID[TIGR00379] cobyrinic acid a,c-diamide synthase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0318758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCCCG CCCCCGGCCT CCTCGTCGCC GCGCCGCGCT CCGGCTCCGG CAAGACCACG 
GTGACGCTCG CGCTGATGCG AGCCTTGCGC CGCCGAGGCG TGGCGATCCG CGGCGCGAAA
TGCGGGCCGG ACTACATCGA CCCCGCCTTC CACGAGGCGG CGACGGGCCT CCCCAGCCTC
AACCTCGACA GCTTTGCCAT GCCGGACGCG CTGCTCGATG CCTGCGCCGG CCTGAGCGCG
CGCGAGGCCG ATCTCGTCAT CGCCGAGGGC TCGATGGGCC TGCATGACGG TATCGTTGCG
GGCGAGGGCC GCACCGGCGC CAACGCCGAC ATCGCCGCGC GCTACGGCTG GCCGGTGGTT
TTGGTGCTCG ACGTGTCGGG TGCCGCGCAA TCGGCGGCGG CCGTGGCGCT CGGCTGCGCG
GCCTACGATT CGCGAATCCG GATCGCGGGC GTGATCCTGA ACAAGGTCGC GAGCCCGCGC
CACCGCCGTC TCGTCGAGGC AGGGCTGTCG CGGGTCGGCC TGCCGGTGCT CGGCGCCTTC
CCGCGCGAGG CGAGCCTCGT CCTGCCCGAG CGCCATCTCG GCCTCGTCCA GGCCGGCGAG
ACCGCCGACC TCTACGCCCG CCTCGACCGG CTCGCCGATC TCGCGGAAAC CTCCCTCGAC
CTCGACGCGA TTCTTGCCGT GGCCGGCGGG CACGCCCCCA TCGCCACCGA CGGCCTGCCG
AGGCCGCCGG CGCAGCGGAT CGCAGTGGCG CGGGATGCCG CCTTCTCGTT CCTGTATCCG
CACATGCTGG CCGGCTGGCG CGCGGCCGGC GCCGAGATCG TGCCGTTCTC GCCGCTGGCT
GACGAGGCGC CGGGGATCGA TTGCGACGCT TGCTGGCTGC CCGGCGGCTA CCCCGAACTG
CATGCGGGCC AGCTCGCGGC AGCGCAAAGC TTCCTCGGCG GCTTACGCGA CTTCGCGCAG
ACGCGGCCGG TCCATGGCGA GTGCGGCGGC TACATGGTTC TGGGCGAGAG TCTGGAGGAT
GCGGACGGGC TCACCCATCC GATGTGCGGG CTGCTGCCGG TCGCGACCTC GTATCGGCGG
CGCAAGCTCC ATCTCGGCTA CCGCGTCGCG CATCTCCTCG ACGACGGGCT GCTCGGCACC
GCCGGCACGC GCCTCGTCGG GCACGAGTTC CACTACGCGA GCGAACTCAC GCCGGCCCCG
GGGGACGAAA TTGCGCTGGC GCGGGTGACG GATGCGGAAG GGGTGCCGCT CGGCCTCGCC
GGCCACCGCC GGGGCCGCGT CACGGGCAGC TTCTTCCACC TGATCGCCGG GACGGCCGAA
GCGTGA
 
Protein sequence
MTPAPGLLVA APRSGSGKTT VTLALMRALR RRGVAIRGAK CGPDYIDPAF HEAATGLPSL 
NLDSFAMPDA LLDACAGLSA READLVIAEG SMGLHDGIVA GEGRTGANAD IAARYGWPVV
LVLDVSGAAQ SAAAVALGCA AYDSRIRIAG VILNKVASPR HRRLVEAGLS RVGLPVLGAF
PREASLVLPE RHLGLVQAGE TADLYARLDR LADLAETSLD LDAILAVAGG HAPIATDGLP
RPPAQRIAVA RDAAFSFLYP HMLAGWRAAG AEIVPFSPLA DEAPGIDCDA CWLPGGYPEL
HAGQLAAAQS FLGGLRDFAQ TRPVHGECGG YMVLGESLED ADGLTHPMCG LLPVATSYRR
RKLHLGYRVA HLLDDGLLGT AGTRLVGHEF HYASELTPAP GDEIALARVT DAEGVPLGLA
GHRRGRVTGS FFHLIAGTAE A