| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1018 |
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| Symbol | |
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| ID | 5833248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1104132 |
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| End bp | 1104989 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641366807 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001638494 |
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| Protein GI | 163850451 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.136189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCAT TTCCGAAGCC GCCTTTTCCC GACCAACCGC AGCCGATGCC CGGCGCGACC
AACGCCATGA ATCCGAAGCC CGACCACGGT GAGACGAGCT ACAAGGGTTC CGGCCGCCTG
GAGGGCAAGA AGGCGATCAT CACCGGCGGT GATTCCGGAA TCGGCCGTGC CGTGGCGCTG
GCCTACGCCC GCGAAGGCGC CGACGTGCTC ATCTCCTATC TCGATGAGGA GGAGGACGCC
GCCGAGACAC GCCGGCTGAT CGAGGAAGCC GGCCGCAAGG CGGTGCTGGT ACCGGGCAAT
ATCGGCGATG CCGGCCATTG CAAGCGGATC GTCGATCAAG CGGTCGAAGC GTTCGGGCGC
GTCGATATCC TCGTCAACAA TGCCGCGCAT CAGGCGACCT TCAACGATCC GGAAGAGATC
TCGGACGAGG AGTGGGAGAA GACGTTCCAG GTCAACATCC ACGCGATGTT CTACCTGACC
AAGGCCGTGC TGCCGCACAT GCGCGAGGGT TCGGCCATCA TTAATACGAC CTCCGTCAAC
GCCGATACGC CGAGCCCGCA GCTGCTGGCC TACGCCACCA CCAAGGGTGC GATTCAGAAC
TACACCGGCG GCCTCGCGCA GATGCTGGCC GAGAGGGGCA TCCGCGTGAA CTGCGTCGCC
CCGGGCCCGA TCTGGACGCC GCTGATTCCC TCGACCATGC CGGCCGAGAA GGTGAAGCAA
TTCGGCTCGC AGGTGCCGAT GAAGCGGCCG GGTCAGCCGA AGGAGCTCGC GCCGGTCTAC
GTGATGCTGG CCTCCGACGA GTCGAGCTAC GTCTCCGGTG CCACGGTGGC GGTGACGGGC
GGCAAGCCGA TTATCTGA
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| Protein sequence | MESFPKPPFP DQPQPMPGAT NAMNPKPDHG ETSYKGSGRL EGKKAIITGG DSGIGRAVAL
AYAREGADVL ISYLDEEEDA AETRRLIEEA GRKAVLVPGN IGDAGHCKRI VDQAVEAFGR
VDILVNNAAH QATFNDPEEI SDEEWEKTFQ VNIHAMFYLT KAVLPHMREG SAIINTTSVN
ADTPSPQLLA YATTKGAIQN YTGGLAQMLA ERGIRVNCVA PGPIWTPLIP STMPAEKVKQ
FGSQVPMKRP GQPKELAPVY VMLASDESSY VSGATVAVTG GKPII
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