Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1015 |
Symbol | |
ID | 5832269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 1101357 |
End bp | 1101968 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641366804 |
Product | isochorismatase hydrolase |
Protein accession | YP_001638491 |
Protein GI | 163850448 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.174474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCA AAGACGGTTT GAAATTCGGC GATCTCGGCC CGCGTGCCGC CCATCTCTGC GTCGACGCGC AGCGGATGTT CTCCGAGGAG ACCGACTGGC ACACGCCCTG GCTCGCCCGC ATCCTGCCGA ACATCGAGCG CATCGCCGCC GCCCATCCGG AGCGGACCGT GTTCACCCGC TTCGTGCCGC TCCGCTCGCC CGAGGAGGGA AGGGGGGCGT GGCGGCGCTA CTACGAGCAC TGGCCCAAGA TGACGCTGGA GGCGCTCGGA CCTGAGATGG TCGATCTGGT GCCGAGCGTG ACCCGTTTCG TGCCGCCGGC CAAGGTGGTC GACAAGCTGG TCTACTCGCC CTGGCTGAAG CCCGACCTAG CCGGTTTGCT GGAGGCGGAG GCGATCGACA CCCTCGTGGT GACGGGCGGC GAGACCGATG TCTGCGTGCT GGCCACCATC CTCGGCGCGG TCGATCGCGG CTATCGGGTG ATCGTCGCCT GCGATGCGGT GTGCTCCTCC GCCGACCAGA CCTATGACGC GATGATGTTC CTCTACCAGA GCCGCTTCGG CGAGCAGATC GAAACGGCCT CGACCGACGA GATCCTGGGC GCGTGGTCCT GA
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Protein sequence | MARKDGLKFG DLGPRAAHLC VDAQRMFSEE TDWHTPWLAR ILPNIERIAA AHPERTVFTR FVPLRSPEEG RGAWRRYYEH WPKMTLEALG PEMVDLVPSV TRFVPPAKVV DKLVYSPWLK PDLAGLLEAE AIDTLVVTGG ETDVCVLATI LGAVDRGYRV IVACDAVCSS ADQTYDAMMF LYQSRFGEQI ETASTDEILG AWS
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