| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1007 |
|---|
| Symbol | |
|---|
| ID | 5831431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1092733 |
|---|
| End bp | 1093902 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641366796 |
|---|
| Product | NADH dehydrogenase |
|---|
| Protein accession | YP_001638483 |
|---|
| Protein GI | 163850440 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCC TCGTCACCGC GCCCGGCGCG ACCACCCGCC CGCAATCGCA GCTCGTGACC
GTGTTCGGCG GTTCCGGCTT CCTCGGGCGC CACGTGGTGC GGGCCCTGGC AAAGCGCGGC
TATCGAATTC GCGTCGCCGT GCGCCGGCCC GATCTCGCCC TGTTCTTGCA ACCACTCGGC
AAGGTCGGTC AGATCGTCGG CGTCCAGGCC AATCTTCGCT ATCCCGACTC GATCCGCCGC
GCGGTCGAGC ATTCCGACAT CGTCATCAAC CTCGTCGGCA TCCTGCAGGA ATCGGGCAGC
CAGCGCTTCT CGAAGCTCCA GACGGAAGGG GCCGGCGAGA TTGCGAGAGC CGCCGCGGCG
GTCGGGGCGA AGCTGGTCCA TGTCTCGGCG CTGGGCGCCG ATCCGGATTC ACCCTCGCTC
TACGCCCGCT CCAAGGCGCT CGGCGAGGCG GAGGTGCTGC GCGCCTCTCC CGATGCCGTG
ATCTTCCGTC CCTCGCTGGT CTTCGGCCCC GGCGACGGCT TCTTCAACCG CTTCGCCTCG
CTCGCGACCT TCCTGCCGGC CCTGCCGCTC GCCGGTGCGC AGACCCGCTT CCAGCCGGTC
TTCGTCGGCG ATGTCGCCGA AGCGATCGCC CGCGCGGTCG ATGGGTTGGC CGCCGGTGGC
CGGGTCTACG AGCTCGGCGG GCCGGAGGTG AATACGCTCG AATACTTCGT GCGCTACATG
CTCGAGGTGA CGATGCGCCG CCGCGCCGTG CTCGATCTTC CCGAGCCGGT GGCACGCCTG
CAGGCACGGG TGATCGAGAT CGCCGATACG CTGACCCTCG GGCTGCTTCC CGCCAACCTT
AAACTGACGC GCGATCAGGT CGCCCTGCTT CAGTTCGACA ACGTCGTCTC GGATGCCGCG
AAGGCGGAGG GGCGCACCAT CGAGGCGCTC GGCATCGTGC CGACGGCGGT CGAAGCCGTC
GTGCCCGGCT ACCTCTGGCG GTTCCGCAAG GCGGGGCAGT TCGCGCAGGG GCGTGGCACC
GAAGCGCAAG CCGGTGTGCC CGATCTCCTG GCTCCGCACA GCGAGTCGAC CCAGTCGACG
CATCGCCCCG GCCGCGCCAG CGGCCCGGCG ATCGGCCAGC AGGCCGCCGG TCAAAACCGT
GAGGGCGTTC GCTGGGGGAC ACGCGGCTGA
|
|---|
| Protein sequence | MSSLVTAPGA TTRPQSQLVT VFGGSGFLGR HVVRALAKRG YRIRVAVRRP DLALFLQPLG
KVGQIVGVQA NLRYPDSIRR AVEHSDIVIN LVGILQESGS QRFSKLQTEG AGEIARAAAA
VGAKLVHVSA LGADPDSPSL YARSKALGEA EVLRASPDAV IFRPSLVFGP GDGFFNRFAS
LATFLPALPL AGAQTRFQPV FVGDVAEAIA RAVDGLAAGG RVYELGGPEV NTLEYFVRYM
LEVTMRRRAV LDLPEPVARL QARVIEIADT LTLGLLPANL KLTRDQVALL QFDNVVSDAA
KAEGRTIEAL GIVPTAVEAV VPGYLWRFRK AGQFAQGRGT EAQAGVPDLL APHSESTQST
HRPGRASGPA IGQQAAGQNR EGVRWGTRG
|
|---|
| |