| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1002 |
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| Symbol | |
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| ID | 5832731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 1080285 |
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| End bp | 1082378 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641366784 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001638478 |
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| Protein GI | 163850435 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCT TCTCAACCAT CTGTTACGTC TTTGCGCGTA AAGGCAGTGT GCTTCATTTC
CGAAGCGTCC GACCCGGACT CGTCCTTATG CGCTCACGTC CGAGCACCGA GCCGCATCTC
GACAGGCTGA TCCGCCGCGA TCAGCTCGAG GCGGTGCGCG CCAGCGTGCA GCAGGCCCTG
CCCGTCAACG TGCTTCTCGG TCTGGCCGGC TTCCTGGTCG CCCTGCATTC CGGGCACGGC
GCCCTCGGCG CCCTCTGGTT TTCCGCCTCC ACCGCCTTCA ACGGCTTGCG CTTTGGGTTG
TGCCGCGCGC CCTGTGCGGG GCTGGCGATG TCCCCCGGCC GGGCTCCGAT CTCCGAAGAG
GCTGCGGCCC GCTCGATCGA CCGGCACCTC TGGCTGGCCT GCCTCGCCGC GCTCCTCTCC
GGCTCTGTCT GGGCCCTCCT GCCGCTCCTG TGCGACGGCT ACACCTCGGC GCAGACGCTG
TTCTATCTCA CCGTCACCTG CGGGATCACG GCCGGCGCGG TGACCCACGG CATCGCCTAC
GCGCGGATCC CGATCTGCTT CATCACGCCG CCGCTCGTCT CGGTCGCGGG GTGCCTGCTC
GCCGTCGGCG GTTTCGACCA GACCTGCCTC GCGGCCACCG TGCTGCTGTA CCTGGCCGCC
CTGATCCGCA GTTCGATCGC GACCGAGCGG GGATTCCGGG AGACCAGCCG CCTGAAGAAC
GAGGCAACCG CGCTCGCCGA GGCGCGCAAG GCCGCCCATG CCAGCGCGAG CGCCCTGGCG
GAGGAAATGC GCGAGCGCGC GACGCATGAC GGGCTGACCG GCCTCCTGAA CCGCGCGGGC
TTCATCCAGC GGGCCGAGGA GCAACTGGCG GCGGGGGCGT CGGTCTGCCT GATGCTGCTC
GATCTCGACG GCTTCAAGTC GGTCAACGAC GTCTACGGCC ACTCCACCGG GGACCGGGTT
CTCGCTGAGG TCGCCCGCCG CATCCGCGTC GCCGTGCCGG TGGATTGCGA TGCCGCCCGT
CTCGGGGGAG ACGAGTTCGC CCTCGTCTAC GACACTGCCC GGGTGATCGA GAGCCCGGCC
GCCCTCGCGG AGCGCCTGAT CCGGACCGTC GCCCAACCGT TCGAGAGCTT CGATACGGGT
CGGCTGGGCA TGAGCATCGG CATCTGTCAC CGTCCGTCGG ACAGCCTGAC ACATCTGCTG
AGTTGCGCCG ACGAGGCGCT CTATGCCGCC AAGCATTCGG GCCGCAATCA CTTCCACCTG
TTCGACGACG GGCTCAGCAC GCGCCTGGAG ATGCGGCGCG ACTGCGAACG CGACCTCTCG
CAGGCCCTGG CCGAGGGAGA GCTGGAGGTG TGGTTCCAGC CAATCTTCGG CCCGGACGGT
CGCAGCGTGA CCAATCTGGA GGCGCTGGTG CGCTGGCACC ACCCGGTGCA TGGCTGGGTG
CCGCCCGCCG ACCTGATCTC CGCCGCCGCC ATGGCGGGTC TGACGGAATC GCTGCTGCGC
TTCATCCTGG AGCAGGTCTG CGCGATGCTG TGCGCGCTGC GGACGCGGGG ACTGCACGAC
CTTTCGGTGG CGATGAACGT CTCGCCGCGG GAGATGGCGC AGATCGCGGT CGATGAGATC
GTACTCGGGC GGCTTCGGGT GCTCGGTCTG CCGGCGACGG CCCTGGAGAT CGAGATCACC
GAGGAGACGG CGCTCGACAT CGAGGCGGTG CAGGGCAAGC TGCTGGCGCT GTCGCGGGCC
GGCATCCGGA TGGCGCTCGA TGATTTCGGG ACCGGCTACT CGTCCCTGGC CTCGGTACGC
CAGTTGCGGG CCGACCGGGT CAAGATCGAC CGCAGTCTCG TGACCGGTTT GTCGGAGGCC
GAGGACAAGC GCGGCCTCGT CCAGGCGGTG CTCGGTCTCG GCCGGGCGCT CGGTCTCGAA
GTCGTGGCCG AGGGCATCGA GACGGCGGAC GACCTCGCCA CGCTCCAGGC CATGGGCTGC
CCCTTCATGC AGGGCTACCA TCTCGGCCGC CCGCAGCCGC GGGACGACAT CCTGCGCTTC
CTCGATGCGC GCCCCCGCGC GGATGTTCAG GCGCTTCGCC TGCGCGAGGC GTGA
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| Protein sequence | MKLFSTICYV FARKGSVLHF RSVRPGLVLM RSRPSTEPHL DRLIRRDQLE AVRASVQQAL
PVNVLLGLAG FLVALHSGHG ALGALWFSAS TAFNGLRFGL CRAPCAGLAM SPGRAPISEE
AAARSIDRHL WLACLAALLS GSVWALLPLL CDGYTSAQTL FYLTVTCGIT AGAVTHGIAY
ARIPICFITP PLVSVAGCLL AVGGFDQTCL AATVLLYLAA LIRSSIATER GFRETSRLKN
EATALAEARK AAHASASALA EEMRERATHD GLTGLLNRAG FIQRAEEQLA AGASVCLMLL
DLDGFKSVND VYGHSTGDRV LAEVARRIRV AVPVDCDAAR LGGDEFALVY DTARVIESPA
ALAERLIRTV AQPFESFDTG RLGMSIGICH RPSDSLTHLL SCADEALYAA KHSGRNHFHL
FDDGLSTRLE MRRDCERDLS QALAEGELEV WFQPIFGPDG RSVTNLEALV RWHHPVHGWV
PPADLISAAA MAGLTESLLR FILEQVCAML CALRTRGLHD LSVAMNVSPR EMAQIAVDEI
VLGRLRVLGL PATALEIEIT EETALDIEAV QGKLLALSRA GIRMALDDFG TGYSSLASVR
QLRADRVKID RSLVTGLSEA EDKRGLVQAV LGLGRALGLE VVAEGIETAD DLATLQAMGC
PFMQGYHLGR PQPRDDILRF LDARPRADVQ ALRLREA
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