| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0993 |
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| Symbol | |
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| ID | 5831908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 1069579 |
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| End bp | 1071924 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641366775 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_001638469 |
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| Protein GI | 163850426 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.683317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTC ACCGCCGCTT CACCGTGCTG ATGTGCACGC CCGCCTTCGA TCCGGATGAT
CTGGAGGGCG CGCGCGTCGA TCAGATCGTC GCGGCGGTGG AGAAGCGCGG CTTCGAGGTG
GTGCGGGCGC GGCGCGTCGA GGATGCCTCG ATCGCGGTGC AGACCGACTC CGCCGTCGGC
TGCCTCGTGG TGGATTGGGG CAAGCGCGGA CTCGAGGGCA AGGCGGCTGC GCTCATCGAC
ATGATGCGCA AGCGCGGCCT GGAGATGCCG ATCGTCATCA TGGTCCGCCG CAAGCGGCTG
GAGGACATCC CGGTCGAGCT GCTCGACTTC ATCGACGGCT ACATCTTCCT CGCCGAGGAG
ACGCCCGAAT TCATTGCCCG CGGCCTCGTT TCCCGCGTGA CGCAGTATGC CGACACGCTG
AAGACGCCGT TCTTCGGCGC GCTCGTCGAT TACGCCGAAG AGGGCAACCA GCTCTGGACC
TGCCCCGGCC ATAACGGCGG CATCTTCTAC AACCGCTCGC CGATCGGCCG CATCTTCGTC
GAGCATCTCG GCGAGGCGAT CTTCCGCGAC GACCTCGACA ACTCGGTGCT CGATCTCGGC
GACCTGCTGA CCCACGAGGG GCCCGCGCTC AAGGCGCAGA AGGAAGCGGC AAAGATCTTC
GGGGCGGAAA AGACCTATTT CGTCCTCAAC GGCACCTCGG CCTCGAACAA GGTCGTGCTG
GGCTCGCTGG TGGCCGAGGA CGATCTCGTC CTGTTCGACC GCAACAACCA CAAGGCCGCC
CATCACGGCG CGCTGCTGCT GGCCGGCGGC ATCCCGATTT TCCTCGAGAC CGACCGCAAC
GCCTACGGGT TGATCGGGCC GATCTACCAC GAGGCGCTCG ACGAGGGGCG CATCCGCGAG
AAGATCCGCG ACAACCCGCT CGTGAAGGAC AAGGAGGCGT GGCGCAAGGA GCGCCCGTTT
CGCTGCGCCG TGATCGAACA ATGCACCTAT GACGGCACGA TCTACGACGC GCAGGCGATC
GTCGAGCGCA TCGGCCACCT GTGCGACTAC ATCCTGTTCG ACGAGGCCTG GGCGGGCTTC
ATGAAGTTCC ACCCGCTCTA CCAGCGCCGC TTCGCCATGG GCCTGACCGG GCTCGACGAG
ATTTCGCCGG GCATCATCGC CACGCAATCG ACCCACAAGC AGCTCGCCAG CTTCTCCCAG
GCCTCGCAGA TCCACACCCG CGACGGGCAT ATCCGCGGCC AGACCCGGCG GGTCGAGCAC
AAGCGCCTGA ACGAGAGCTT CCTCGTCCAC GCCTCGACCT CGCCGTTCTA CCCGATCTTC
GCCTCGCTCG ATGTCGGCGC GCAGATGATG AAGGGCCGCT CCGGCGTCGT GCTGTGGGAC
GACACGATCC GCCTCGGCAT CGAGTGGCGC AAGAAGGCCC GCGCCATCCG CAAGGAGTTC
GAGGAGCGCG AGGCCGACCC GAAGCGGCGC TGGTTCTTCG ACCCCTTCGT GCCCGACGTG
GTGAAGGGGC CCGAGGGCAC GGAAATCCCG TGGGAATCCG TGCCGACCGA CGCCCTGGCC
GCCGACGCCC GCTACTGGGA GCTGACGCCG GGCGCGGCGT GGCACGGCTT CACCCATGTC
GCGCCGGGTT TTGCCATCAC CGACCCCAAC AAGCTCACCG TGCTCACCCC CGGCTTCGAC
CGGAAGACGG GGGCCTATGC CGAGCACGGC GTGCCGGCGC CGATCGTCGC GCAATACCTG
CGCGAGAACC GGATCGTCCC GGAGAAGAAC GACCTCAACT CGCTGCTCTT CCTGCTGACG
CCGGGCGTCG AGTCGTCGAA GGCGGGCACG CTCATCTCCG GCCTCGTCGC CTTCAAGCGG
CTGCACGACG ACAACGTGCC GCTCGAAGAG GCGATGCCGG AATTCGTGGC ACGCCGGCCC
AAGCGCTACC GCGGCGTGCG CCTGCGCGAC CTCTGCGCCG ATTACCACGC CTTCCACCGC
GAGTCGGGCA CCTCGGCGCT CCAGCGCAAG CAGTTCATGC CCGAGCACCT GCCGGAGATG
GTGATGGCGC CCAAGGCCGC CGCGCAGATG CTGACCCGCA ACCGGGTCGA TTACGTGCCG
ATCGCGGAGG CCGAGGGGCG CGTCGCCACG ACCCTGATGC TGGTCTATCC GCCCGGCATC
GGCACCGTGC TGCCCGGCGA GCGCCTCGAC GAGCGGGCCA AGCCCATGCT CGACTATTTC
AAGATGTTCG AGGCGGCCGC CAACCTGTTC CCCGGCTTCG AGGCCGAGAT CCAGGGCGTC
TATCGCGAGA GCGATCCGGA CGGGCGCATC CGCTTCCACA CCTACGTCCT GCGCGAGGGC
GCCTGA
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| Protein sequence | MDFHRRFTVL MCTPAFDPDD LEGARVDQIV AAVEKRGFEV VRARRVEDAS IAVQTDSAVG
CLVVDWGKRG LEGKAAALID MMRKRGLEMP IVIMVRRKRL EDIPVELLDF IDGYIFLAEE
TPEFIARGLV SRVTQYADTL KTPFFGALVD YAEEGNQLWT CPGHNGGIFY NRSPIGRIFV
EHLGEAIFRD DLDNSVLDLG DLLTHEGPAL KAQKEAAKIF GAEKTYFVLN GTSASNKVVL
GSLVAEDDLV LFDRNNHKAA HHGALLLAGG IPIFLETDRN AYGLIGPIYH EALDEGRIRE
KIRDNPLVKD KEAWRKERPF RCAVIEQCTY DGTIYDAQAI VERIGHLCDY ILFDEAWAGF
MKFHPLYQRR FAMGLTGLDE ISPGIIATQS THKQLASFSQ ASQIHTRDGH IRGQTRRVEH
KRLNESFLVH ASTSPFYPIF ASLDVGAQMM KGRSGVVLWD DTIRLGIEWR KKARAIRKEF
EEREADPKRR WFFDPFVPDV VKGPEGTEIP WESVPTDALA ADARYWELTP GAAWHGFTHV
APGFAITDPN KLTVLTPGFD RKTGAYAEHG VPAPIVAQYL RENRIVPEKN DLNSLLFLLT
PGVESSKAGT LISGLVAFKR LHDDNVPLEE AMPEFVARRP KRYRGVRLRD LCADYHAFHR
ESGTSALQRK QFMPEHLPEM VMAPKAAAQM LTRNRVDYVP IAEAEGRVAT TLMLVYPPGI
GTVLPGERLD ERAKPMLDYF KMFEAAANLF PGFEAEIQGV YRESDPDGRI RFHTYVLREG
A
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