Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0989 |
Symbol | |
ID | 5833062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 1066009 |
End bp | 1067148 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641366771 |
Product | OpgC protein |
Protein accession | YP_001638465 |
Protein GI | 163850422 |
COG category | [S] Function unknown |
COG ID | [COG4645] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.216393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.503682 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGAGC CGAACGCGAT CGATTTTTGG CGCGGCTTCG CGCTCATCAC GATTTTCATC AACCACATCC CGGGCAATTT CTTCGAGCGC TACACCTTCT CGCAATACGG CATCTCGGAT GCCGCCGAGC TGTTCGTGTT CCTGGCCGGC TGGTCGATCG GGCTGGCCAC CCGCGGTCGC GACGGCCAGC CGGAGCCGCG CCTCACGACC GTGCTGCGCC TCCTGGCGCG CACCGTGGAG GTCTACCGCG CGCAGATCAC GATCATGGCG TTGGCGCTGG CGATGATCGC CGGCTGCGCG CTCTATCTCG ACAACCCGCT CATCCTCGAA TGGCACAATG CCGGCGGCTT CTTCGCCGAC CCGATCCAGA CCATGGTCGG CGTCGTGCTG CTCACGCACC AACTCGGCTT CTTCAACATC CTGCCGCTCT ACGTAGTGCT CATCGCCATC GCCCCGGCCG TCGTGCTGAT CGGCCGGGTG AGCCGGCTCC TGCTGCTGGC GCTCTCGCTG TCGCTCTACG GGGCGAGCCT CGTCTTCGAG TGGAACTTCC CGTCCTGGCC CGGCGAGGGC GATTGGTTCT TCGATCCGCT CTGCTGGCAA TTGCTGCTGG TGCTCGGCTT TCTGTCGAAC GAGGCGACGC GGGGATCGGA GCGGCTGCGG CGCCTCTGGC CGCGGCTGAT GCCGCTCGGC GTCGTCATCG TCGCGGTCGG CGTCGTGCTT GCGGTGCTGG AGCTGCGGCC CGATCCGATG CTGGCGCCGG AGCCGCGCCT CGTCTTCACC TTCGACAAGA CCTACCTTTC GCCCGCCCGG CTGATCCATT TCTGCGGGAT GGTGCTGGCC TTCCAGGGTG TCTACGCCCT CATCGCCCCG CGCGTCGGGC GCCTTGCCCG CTTTCTGTCG GGTTTGGGGC GCAACTCGCT CGCGGTCTTC TCGATGGGAT CGCTGTTGAG CCTCGCCGGA CAGTTCGTGC GCTTCCAAAC CGGCGGCGGT ATCTTCGTTG ACATTTCGGT CGTAGGCTCC GGCCTGATCG CACTGGGTTT CACCGCATGG TTCGTCGAAT GGCGTTCCCG CAGACCGCGG CCGACGCGCA AGGCTCCCGA CACCGCCTCG CCCGCCGACT CGCCGTCCTC CTCGGCCTGA
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Protein sequence | MREPNAIDFW RGFALITIFI NHIPGNFFER YTFSQYGISD AAELFVFLAG WSIGLATRGR DGQPEPRLTT VLRLLARTVE VYRAQITIMA LALAMIAGCA LYLDNPLILE WHNAGGFFAD PIQTMVGVVL LTHQLGFFNI LPLYVVLIAI APAVVLIGRV SRLLLLALSL SLYGASLVFE WNFPSWPGEG DWFFDPLCWQ LLLVLGFLSN EATRGSERLR RLWPRLMPLG VVIVAVGVVL AVLELRPDPM LAPEPRLVFT FDKTYLSPAR LIHFCGMVLA FQGVYALIAP RVGRLARFLS GLGRNSLAVF SMGSLLSLAG QFVRFQTGGG IFVDISVVGS GLIALGFTAW FVEWRSRRPR PTRKAPDTAS PADSPSSSA
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