Gene Mext_0963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0963 
Symbol 
ID5834536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1044657 
End bp1045298 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content66% 
IMG OID641366745 
ProductYceI family protein 
Protein accessionYP_001638439 
Protein GI163850396 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00574961 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGCGCA CGCACGCCCT CGCCGCCCTC CTGCTGGCGG GTTTCGCATT CGCCGCGCCC 
GGCGGTCTAC ACGCACAGGA GGCCACCCAG GGAACGCCAC CCGCTCTGAC CAAGGATCCG
GGGCAGGTGA AGGCCGGGCG CTACCGGCTC GATCCGGCAC ACGGCAAGAT CACGTGGTCG
ATCAGCCATC TCGGCTTCTC GACCTATTAC GGCCAGTTCA CCGAGGTATC GGGCGACCTC
GTCCTCGATC CCGCCGCGCC GGCCAAGAGC AGCCTCTCGG TCAAGATCGG CACCGGCAGC
GCCAACGGTC TCAACGACAA GCTCAACGCG CATCTCAAGC AGCCGGATTT CCTCGACGTC
GGGAAGTTTC CCGAGGCGAC CTTCGTCAGC ACGTCGGTCG AGCCGACGAG CCCGACGACG
GCGCGCGTCA ACGGCACCCT GACCCTACGC GGCGTCTCGA AGCCGGTCTC GTTCGACGCC
ACCTTCAATC AAGCGGGCGT CAACCCGGTC GATAAGATCT ATTCGGTCGG CTTCGACGGC
TGGACGGTGA TCAAACGCTC CGAGTTCGGC GTGAACGCCT TCCTGCCGCT GCTGGGCGAC
GAGGTGTCCC TCCGGTTGGA GGGCGAGTTC AAGCTTCAGT AA
 
Protein sequence
MKRTHALAAL LLAGFAFAAP GGLHAQEATQ GTPPALTKDP GQVKAGRYRL DPAHGKITWS 
ISHLGFSTYY GQFTEVSGDL VLDPAAPAKS SLSVKIGTGS ANGLNDKLNA HLKQPDFLDV
GKFPEATFVS TSVEPTSPTT ARVNGTLTLR GVSKPVSFDA TFNQAGVNPV DKIYSVGFDG
WTVIKRSEFG VNAFLPLLGD EVSLRLEGEF KLQ