Gene Mext_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0961 
Symbol 
ID5834478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1042776 
End bp1043756 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content71% 
IMG OID641366743 
Productalcohol dehydrogenase 
Protein accessionYP_001638437 
Protein GI163850394 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00699995 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGGCCC TGGTGTGCAG CCGGCTCGGT GGGCCGGAGG ATCTCGGCGT CGAGGACCTG 
CCCGATCCGG TGGCGGGCCC CGGCGAGGCG CTGGTGCGAG TGCGAGTCGC GGCGCTGAAC
TTCTTCGACA CGCTCATCAT CGCCGGGCGC TATCAGGTGA AGCCCGAACT GCCGTTCTCC
CCCGGCGGCG AGGCCTGCGG CGTGATCGAA GCTTTAGGCG CTGGCGCCGA GAGCTTCTCC
GTCGGCGACC GGGTGATGGT CCATCTCAGC CACGGCACCG CCCGCGAGCG GATCGCGGTT
CCGGTGAAGC GCCTCGCACG GGTGCCGGAG GCCGTCTCCG ACGAGATCGC CGCCGGGCTC
TCGATCACCT ACGGCACCAC GCTTCACGCG CTCCGGGATC GCGCCCGCAT CCGGCCGGGC
GAAACCCTCG TCGTGCTCGG CGCCTCGGGC GGTGTCGGGC TCGCGGCGGT CGAACTCGGC
AAGCTGCTCG GGGCGCGCGT CATCGCCTGC GCCTCCTCGC CCGAAAAGCT CGAGACCGCC
CGCGCCCACG GCGCCGACGA CCTGATCGAC TACAAGGCGG ACAACCTGCG CGAGGCCTTG
CGGCGCCTCA CCGGCGAGCG CGGCGTCGAC GTGGTCTACG ACGCGGTCGG CGGTGATCTG
GCCGAGCCGG CCATGCGCGC GCTCGGCTGG AAGGGGCGCT TCCTCGTGAT CGGCTTTGCC
GCGGGCGAGA TCCCGAAATT CCCCCTCAAT GTCATCATGC TCAAGGGCAT CGACGTCCAG
GGCGTTCATT GGGGCGCCTT CGTCGAGCGC GAGCCGGAGG CGCATGCGGC CAACCAAGCC
CAACTGCTCG CCTGGGCGGC GGAGGGCAAA CTCACCGTGA AGGTGCACGG CGTCTATCCG
CTCGACGGCT ACGCGGAGGC GCTCGGCGTG CTCGTCCGCC GCGAGGCGGT CGGCAAGGTG
TTGCTCGACC TCGGAGGCTA G
 
Protein sequence
MKALVCSRLG GPEDLGVEDL PDPVAGPGEA LVRVRVAALN FFDTLIIAGR YQVKPELPFS 
PGGEACGVIE ALGAGAESFS VGDRVMVHLS HGTARERIAV PVKRLARVPE AVSDEIAAGL
SITYGTTLHA LRDRARIRPG ETLVVLGASG GVGLAAVELG KLLGARVIAC ASSPEKLETA
RAHGADDLID YKADNLREAL RRLTGERGVD VVYDAVGGDL AEPAMRALGW KGRFLVIGFA
AGEIPKFPLN VIMLKGIDVQ GVHWGAFVER EPEAHAANQA QLLAWAAEGK LTVKVHGVYP
LDGYAEALGV LVRREAVGKV LLDLGG