| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0947 |
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| Symbol | |
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| ID | 5834479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 1023687 |
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| End bp | 1025831 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641366729 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001638423 |
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| Protein GI | 163850380 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.903588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0137275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCGC AGGCCGAAGG TCAGGAAGTC GCCGGTCGGC GGACAGGTCT GGGAAGCGAG
CAGGGCGGCC GAGAGACGGT TGGCAGGCAC TTGCTGCGGA CAGGCTCGGG ACTCTGCCTG
ACCGTCGCCG GCTTTGCTGC CACCGCGCTG ATGGCCTCGC TCTCCGCCGA GCCGACCCTG
AGGCTCACGG TTGTCGGGGG CGCGACTATC CTCGCTCTCG TTCTCGTCTA CCTGATTCTG
CGCCGGCTCG CCCGCAGCCT CACCCGCGCG ATGCAGGCCG CCGAAGGCAT CGCCCTGGCG
ACCGCTCCCG CCGTCGCGCT CCGGACTCCC CCGGCATGCG CCTCCGGCGA GGCCCCACTT
CCGGACGGGC GCCGCCTGCT CGCCGACCGC CCTCGGCTCG GTGACGGGGC CGACCCGGCC
ATCCTCACCG ACATTGCGGC CCTGAAGCTC CGCGAGGACG CGTTGAGCGA TCGCATCGCC
CGTTTGAACG CGGCGCTCGA TACCCTCTCC CTCGGCTTTC TTCTCTACGA TCGCGATCAC
CGTCTGCTGG TAGTCAACCG CCGCTACCAC GAGATCTACC GGCTGCCTCC GGGGGCCGTG
ACCCCCGGCA TGTCGGCGCT GGAAGTGCTG CGCAGCAATG TCGGGACCGG TGATCAGCCG
GACCGGAGCG AGGACGAGTG CATTGCCGAG ATCGGCGTGA TGATGGGGGC CGATGCCGTG
CCGACCCAGA TCCAGCATCT CGCCGACGGA CGCGTCGTCG CCGTCGAGAT TCAGCCGATT
GCCGGCGGCG GCTTCGTGGC GATCTACGAG GAAGCGACCG AACGCTGGAA CGCCGAGACC
CGCATCGCTC ACATGGCCCG GCACGATGCC GTCACCGACC TGCCCAACCG CGTGTTGCTG
CGCGAGCGGA TCGAGGGGGC GATCACCCGG GCACGGCGCG AAACCGGTTT CGCCGTGCTC
TGCCTCGACC TCGACAACTT CAAACAGGTC AACGACACCC TCGGCCACGC CGTCGGCGAC
GAGTTGCTGC GGGCGGTGGC GCACCGCCTC AGGGCCTGCC TGCGCGAGGT CGACACCGTC
GCCCGTCTCG GCGGCGACGA GTTCGCGATC ATCCAGGCGA GCGTCGCGAC GCCGGCCGAT
GCCGCCACCC TGGCCCAGCG CATCCTCGAC GTGGTCAGCG CTCCCTACGC GCTGACCCAT
CACTCCGTCA TCGTCGGCGT CAGTATCGGC ATCGCGCTCG CGCCCGGAGA CGGGCTGGAA
CCCGAGCGGC TGATGCAATG CGCCGACGTC GCCCTCTACC GCGCCAAGGA CGACGGGCGC
GGTGTGTTCC GGTTCTTCGA GGCGCAGATG GATGCCCGCC TCCAGGCCCG GCGCGCCCTC
GAACTCGACC TGCGCGCCGC CTTCGAGGCG GAGGCGTTCG ACCTGCATTA TCAGCCGATC
TACGACCTCG CCGAGGAGCG CATCAGCGGC TTCGAGGCGC TGCTGCGCTG GACTCACCCG
ACCCGCGGCC GGGTCTCACC GGCCGAGTTC GTGCCGCTCG CCGAGGAGAT CGGCCTCATC
GTGCCCCTGG GCGAGTGGGT GCTCCGCCGC GCCTGCCGTG AAGCCTCGAA CTGGCCGGAC
GGTCTCAAGG TCGCGGTCAA CGTCTCGGCG GCGCAGTTCA CCTCGATCGC GCTGATCGGA
ACGGTGCAGG CGGCGCTCGC CGAGAGCGGC CTCTCTGCCC GCCGCCTCGA ACTGGAGATC
ACCGAGAGCG TGCTGTTGGT GAACGGCAGC GCCACGGTCG CGATTCTGCA CGGACTCCGG
GACCTCGGCG CCCGGATCGC CATGGACGAT TTCGGCACCG GCTATTCCAG CTTGAGCTAC
CTGCGCAGCT TCCCCTTCGA CAAGATGAAG GTGGATCAGT CCTTCACCCG CGACCTGACG
GTGGAGCAGG GCTCCGGTTT CATCGTGAGG GCGGTGGTCA GCCTCGCCTC CAGCCTCGGG
ATGACGACGA CCGCGGAAGG CGTCGAGACA CCGGAGCAAC TCGCTTGGCT GCGCGAGGAG
GGCTGCGACG AGGTGCAAGG CTACCTGTTC AGCCCACCGG TGCCGGCGAG CGAACTCCCG
GCCCTGCTCG ATATCTGGAA CGGCCGGAAA CGCCGCGCCG CGTGA
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| Protein sequence | MQAQAEGQEV AGRRTGLGSE QGGRETVGRH LLRTGSGLCL TVAGFAATAL MASLSAEPTL
RLTVVGGATI LALVLVYLIL RRLARSLTRA MQAAEGIALA TAPAVALRTP PACASGEAPL
PDGRRLLADR PRLGDGADPA ILTDIAALKL REDALSDRIA RLNAALDTLS LGFLLYDRDH
RLLVVNRRYH EIYRLPPGAV TPGMSALEVL RSNVGTGDQP DRSEDECIAE IGVMMGADAV
PTQIQHLADG RVVAVEIQPI AGGGFVAIYE EATERWNAET RIAHMARHDA VTDLPNRVLL
RERIEGAITR ARRETGFAVL CLDLDNFKQV NDTLGHAVGD ELLRAVAHRL RACLREVDTV
ARLGGDEFAI IQASVATPAD AATLAQRILD VVSAPYALTH HSVIVGVSIG IALAPGDGLE
PERLMQCADV ALYRAKDDGR GVFRFFEAQM DARLQARRAL ELDLRAAFEA EAFDLHYQPI
YDLAEERISG FEALLRWTHP TRGRVSPAEF VPLAEEIGLI VPLGEWVLRR ACREASNWPD
GLKVAVNVSA AQFTSIALIG TVQAALAESG LSARRLELEI TESVLLVNGS ATVAILHGLR
DLGARIAMDD FGTGYSSLSY LRSFPFDKMK VDQSFTRDLT VEQGSGFIVR AVVSLASSLG
MTTTAEGVET PEQLAWLREE GCDEVQGYLF SPPVPASELP ALLDIWNGRK RRAA
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